Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm25836-201ENSMUST00000158918 123 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Nron-204ENSMUST00000158971 370 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx2P43241 Gm28647-201ENSMUST00000188416 197 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm43626-201ENSMUST00000198575 162 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm44181-201ENSMUST00000203106 483 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm44520-201ENSMUST00000205447 802 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm45296-201ENSMUST00000209625 205 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm45654-201ENSMUST00000210980 123 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm18645-202ENSMUST00000212222 760 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.06□□□□□ -2.08
Cdx2P43241 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx2P43241 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.06□□□□□ -2.08
Cdx2P43241 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cdx2P43241 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cdx2P43241 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.06□□□□□ -2.08
Cdx2P43241 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Cdx2P43241 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Cdx2P43241 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm23109-201ENSMUST00000116867 126 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm14652-201ENSMUST00000118479 235 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm13678-201ENSMUST00000118926 340 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm13406-201ENSMUST00000121991 256 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Mir1927-201ENSMUST00000158579 109 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Mir669n-201ENSMUST00000158636 54 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm24813-201ENSMUST00000175310 84 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm23190-201ENSMUST00000180307 64 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Cdx2P43241 Npn2-202ENSMUST00000189275 235 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.05□□□□□ -2.08
Cdx2P43241 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm19540-201ENSMUST00000221843 810 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm25199-201ENSMUST00000083095 104 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.05□□□□□ -2.08
Cdx2P43241 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cdx2P43241 Gm24098-201ENSMUST00000102075 109 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm25381-201ENSMUST00000102078 109 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm26154-201ENSMUST00000102339 96 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx2P43241 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Cdx2P43241 Gm11429-201ENSMUST00000119089 144 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm12935-201ENSMUST00000119352 246 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Cdx2P43241 Gm24854-201ENSMUST00000158025 98 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm24769-201ENSMUST00000158506 129 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm24875-201ENSMUST00000158888 104 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm23289-201ENSMUST00000175615 108 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm17929-201ENSMUST00000186851 627 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm9541-201ENSMUST00000188409 502 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx2P43241 Gm44857-201ENSMUST00000208331 196 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.04□□□□□ -2.08
Cdx2P43241 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.04□□□□□ -2.08
Cdx2P43241 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.04□□□□□ -2.08
Cdx2P43241 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx2P43241 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx2P43241 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cdx2P43241 Gm25636-201ENSMUST00000082666 133 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 Gm22444-201ENSMUST00000093693 108 ntBASIC2.04□□□□□ -2.08
Cdx2P43241 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Cdx2P43241 Mir599-201ENSMUST00000102378 88 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm12383-201ENSMUST00000120628 760 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm25107-201ENSMUST00000122472 129 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm22225-201ENSMUST00000157358 278 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm22093-201ENSMUST00000158980 111 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm15900-201ENSMUST00000161584 342 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm20534-201ENSMUST00000172957 172 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cdx2P43241 Gm27470-201ENSMUST00000184070 210 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 153.9 ms