Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HttP42859 Mir6540-201ENSMUST00000184886 108 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm12401-201ENSMUST00000118435 228 ntBASIC1.57□□□□□ -2.16
HttP42859 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HttP42859 Gm37708-201ENSMUST00000192337 895 ntBASIC1.57□□□□□ -2.16
HttP42859 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.57□□□□□ -2.16
HttP42859 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HttP42859 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.57□□□□□ -2.16
HttP42859 Gm16261-201ENSMUST00000096813 205 ntBASIC1.57□□□□□ -2.16
HttP42859 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HttP42859 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
HttP42859 Gm22665-201ENSMUST00000158720 275 ntBASIC1.57□□□□□ -2.16
HttP42859 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.57□□□□□ -2.16
HttP42859 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HttP42859 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HttP42859 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HttP42859 Gm25883-201ENSMUST00000157781 271 ntBASIC1.56□□□□□ -2.16
HttP42859 Gm27636-201ENSMUST00000184528 122 ntBASIC1.56□□□□□ -2.16
HttP42859 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
HttP42859 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.56□□□□□ -2.16
HttP42859 Gm16976-205ENSMUST00000227324 226 ntBASIC1.56□□□□□ -2.16
HttP42859 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HttP42859 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HttP42859 Gm43662-201ENSMUST00000198310 2271 ntBASIC1.56□□□□□ -2.16
HttP42859 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HttP42859 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
HttP42859 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.56□□□□□ -2.16
HttP42859 Gm7123-201ENSMUST00000117647 213 ntBASIC1.56□□□□□ -2.16
HttP42859 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.56□□□□□ -2.16
HttP42859 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
HttP42859 Gm13194-201ENSMUST00000142299 311 ntBASIC1.55□□□□□ -2.16
HttP42859 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm33866-201ENSMUST00000196911 289 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm43550-201ENSMUST00000200597 303 ntBASIC1.55□□□□□ -2.16
HttP42859 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
HttP42859 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HttP42859 Gm15526-201ENSMUST00000112504 204 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm12386-201ENSMUST00000117380 688 ntBASIC1.55□□□□□ -2.16
HttP42859 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HttP42859 Gm23126-201ENSMUST00000104260 134 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm25768-201ENSMUST00000158570 98 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm25025-201ENSMUST00000175018 111 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm6850-201ENSMUST00000210031 530 ntBASIC1.55□□□□□ -2.16
HttP42859 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.55□□□□□ -2.16
HttP42859 Gm13714-201ENSMUST00000117313 221 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm13228-201ENSMUST00000118937 634 ntBASIC1.54□□□□□ -2.16
HttP42859 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC1.54□□□□□ -2.16
HttP42859 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HttP42859 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.54□□□□□ -2.16
HttP42859 Gm43489-201ENSMUST00000196810 993 ntBASIC1.54□□□□□ -2.16
HttP42859 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HttP42859 AC124400.1-201ENSMUST00000225779 193 ntBASIC1.54□□□□□ -2.16
HttP42859 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.54□□□□□ -2.16
HttP42859 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.54□□□□□ -2.16
HttP42859 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
HttP42859 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HttP42859 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HttP42859 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm23137-201ENSMUST00000157559 107 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm23180-201ENSMUST00000158686 125 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm38214-201ENSMUST00000192581 988 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm37119-201ENSMUST00000195691 389 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm43739-201ENSMUST00000198294 307 ntBASIC1.54□□□□□ -2.16
HttP42859 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.54□□□□□ -2.16
HttP42859 Gm43882-201ENSMUST00000204871 2264 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm24572-201ENSMUST00000175505 88 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm18991-201ENSMUST00000209225 746 ntBASIC1.53□□□□□ -2.16
HttP42859 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.53□□□□□ -2.16
HttP42859 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
HttP42859 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC1.53□□□□□ -2.16
HttP42859 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HttP42859 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HttP42859 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.53□□□□□ -2.16
HttP42859 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HttP42859 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.53□□□□□ -2.16
HttP42859 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.53□□□□□ -2.16
HttP42859 Gm25491-201ENSMUST00000158733 308 ntBASIC1.53□□□□□ -2.17
HttP42859 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC1.53□□□□□ -2.17
HttP42859 Gm27607-201ENSMUST00000185162 122 ntBASIC1.53□□□□□ -2.17
HttP42859 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.53□□□□□ -2.17
HttP42859 AC105169.1-201ENSMUST00000218912 1294 ntBASIC1.53□□□□□ -2.17
HttP42859 Mir141-201ENSMUST00000083540 72 ntBASIC1.53□□□□□ -2.17
HttP42859 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm23960-201ENSMUST00000157206 131 ntBASIC1.52□□□□□ -2.17
HttP42859 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm43510-201ENSMUST00000197922 353 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm45063-201ENSMUST00000203726 472 ntBASIC1.52□□□□□ -2.17
HttP42859 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HttP42859 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HttP42859 Mir3106-201ENSMUST00000175401 82 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm29460-201ENSMUST00000188607 714 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm18660-201ENSMUST00000199542 629 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm22304-201ENSMUST00000082688 129 ntBASIC1.52□□□□□ -2.17
HttP42859 Gm12448-201ENSMUST00000118852 655 ntBASIC1.51□□□□□ -2.17
HttP42859 Gm12372-201ENSMUST00000121654 768 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms