Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26101-201ENSMUST00000157246 105 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm16289-201ENSMUST00000162079 183 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm25194-201ENSMUST00000177987 79 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm18448-201ENSMUST00000186286 599 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm37281-201ENSMUST00000192412 439 ntBASIC3.5□□□□□ -1.85
Traf1P39428 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm18982-201ENSMUST00000198118 529 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Traf1P39428 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Gm44830-201ENSMUST00000207667 584 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Gm44657-201ENSMUST00000208568 450 ntBASIC3.5□□□□□ -1.85
Traf1P39428 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.5□□□□□ -1.85
Traf1P39428 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.5□□□□□ -1.85
Traf1P39428 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Traf1P39428 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Traf1P39428 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.49□□□□□ -1.85
Traf1P39428 Gm11813-201ENSMUST00000118586 291 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm14411-201ENSMUST00000121798 914 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm14804-201ENSMUST00000122322 508 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm22755-201ENSMUST00000157143 100 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm25391-201ENSMUST00000157342 134 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm26271-201ENSMUST00000158349 104 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
Traf1P39428 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm22858-201ENSMUST00000174972 76 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm23402-201ENSMUST00000178130 107 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm26189-201ENSMUST00000179879 107 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm29641-201ENSMUST00000188955 259 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm42805-201ENSMUST00000196158 276 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm43652-201ENSMUST00000196219 675 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm43810-201ENSMUST00000201018 232 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm18691-201ENSMUST00000203593 872 ntBASIC3.49□□□□□ -1.85
Traf1P39428 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.49□□□□□ -1.85
Traf1P39428 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Traf1P39428 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Traf1P39428 Gm25856-201ENSMUST00000082786 75 ntBASIC3.49□□□□□ -1.85
Traf1P39428 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.49□□□□□ -1.85
Traf1P39428 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm13541-201ENSMUST00000119519 283 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm14240-201ENSMUST00000120353 546 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Traf1P39428 Gm14562-201ENSMUST00000129885 543 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.48□□□□□ -1.85
Traf1P39428 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Traf1P39428 Gm16588-201ENSMUST00000162889 355 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm27520-201ENSMUST00000184872 81 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.48□□□□□ -1.85
Traf1P39428 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.48□□□□□ -1.85
Traf1P39428 Gm44393-201ENSMUST00000197418 138 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm44391-201ENSMUST00000198490 93 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm45048-201ENSMUST00000207058 429 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.48□□□□□ -1.85
Traf1P39428 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.48□□□□□ -1.85
Traf1P39428 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.48□□□□□ -1.85
Traf1P39428 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Traf1P39428 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.48□□□□□ -1.85
Traf1P39428 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Traf1P39428 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Traf1P39428 Gm15936-201ENSMUST00000118706 460 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.47□□□□□ -1.85
Traf1P39428 Gm16354-201ENSMUST00000155376 150 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm22322-201ENSMUST00000157151 111 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm24876-201ENSMUST00000158780 92 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm22853-201ENSMUST00000174974 131 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm37568-201ENSMUST00000191755 364 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm43171-201ENSMUST00000199882 291 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm44520-201ENSMUST00000205447 802 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm45173-201ENSMUST00000206819 305 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gm6012-201ENSMUST00000210821 730 ntBASIC3.47□□□□□ -1.85
Traf1P39428 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.47□□□□□ -1.85
Traf1P39428 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.47□□□□□ -1.85
Traf1P39428 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Mir463-201ENSMUST00000093570 75 ntBASIC3.47□□□□□ -1.85
Traf1P39428 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Traf1P39428 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Traf1P39428 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Traf1P39428 Gm25407-201ENSMUST00000104102 134 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm25376-201ENSMUST00000104340 133 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm13482-201ENSMUST00000119842 254 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm24517-201ENSMUST00000122560 107 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.46□□□□□ -1.86
Traf1P39428 Gm25637-201ENSMUST00000157529 107 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm24213-201ENSMUST00000158255 258 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm17162-201ENSMUST00000168538 473 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm21726-201ENSMUST00000179654 392 ntBASIC3.46□□□□□ -1.86
Traf1P39428 Gm27527-201ENSMUST00000183903 99 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms