Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RaraP11416 Gm11506-201ENSMUST00000122414 470 ntBASIC4.82□□□□□ -1.64
RaraP11416 Trav20-201ENSMUST00000142754 347 ntBASIC4.82□□□□□ -1.64
RaraP11416 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Gm21850-201ENSMUST00000179792 359 ntBASIC4.82□□□□□ -1.64
RaraP11416 Gm28118-201ENSMUST00000185957 294 ntBASIC4.82□□□□□ -1.64
RaraP11416 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.82□□□□□ -1.64
RaraP11416 Trbv11-201ENSMUST00000194354 260 ntBASIC4.82□□□□□ -1.64
RaraP11416 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.82□□□□□ -1.64
RaraP11416 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.82□□□□□ -1.64
RaraP11416 Gm44208-201ENSMUST00000205199 421 ntBASIC4.82□□□□□ -1.64
RaraP11416 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RaraP11416 Gm19790-201ENSMUST00000214414 251 ntBASIC4.82□□□□□ -1.64
RaraP11416 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.82□□□□□ -1.64
RaraP11416 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.82□□□□□ -1.64
RaraP11416 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RaraP11416 Gm23626-201ENSMUST00000082458 133 ntBASIC4.82□□□□□ -1.64
RaraP11416 Gm22744-201ENSMUST00000083444 65 ntBASIC4.82□□□□□ -1.64
RaraP11416 Mir30b-201ENSMUST00000083542 96 ntBASIC4.82□□□□□ -1.64
RaraP11416 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RaraP11416 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RaraP11416 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.81□□□□□ -1.64
RaraP11416 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RaraP11416 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
RaraP11416 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.81□□□□□ -1.64
RaraP11416 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm24544-201ENSMUST00000103862 110 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm15560-201ENSMUST00000117107 643 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm11633-201ENSMUST00000118176 444 ntBASIC4.81□□□□□ -1.64
RaraP11416 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.81□□□□□ -1.64
RaraP11416 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.81□□□□□ -1.64
RaraP11416 Gm25390-201ENSMUST00000157341 103 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm25384-201ENSMUST00000157807 105 ntBASIC4.81□□□□□ -1.64
RaraP11416 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm22243-201ENSMUST00000178754 120 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm27760-201ENSMUST00000185048 114 ntBASIC4.81□□□□□ -1.64
RaraP11416 Mir7661-201ENSMUST00000197023 61 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm43600-201ENSMUST00000202134 223 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm44844-201ENSMUST00000207242 336 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm45380-201ENSMUST00000210465 315 ntBASIC4.81□□□□□ -1.64
RaraP11416 Supt4b-201ENSMUST00000214434 351 ntBASIC4.81□□□□□ -1.64
RaraP11416 Gm23650-201ENSMUST00000083355 70 ntBASIC4.81□□□□□ -1.64
RaraP11416 Mir215-201ENSMUST00000083628 112 ntBASIC4.81□□□□□ -1.64
RaraP11416 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.81□□□□□ -1.64
RaraP11416 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
RaraP11416 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
RaraP11416 Svet1-201ENSMUST00000209370 3940 ntBASIC4.81□□□□□ -1.64
RaraP11416 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RaraP11416 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.81□□□□□ -1.64
RaraP11416 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RaraP11416 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.81□□□□□ -1.64
RaraP11416 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.8□□□□□ -1.64
RaraP11416 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.8□□□□□ -1.64
RaraP11416 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.8□□□□□ -1.64
RaraP11416 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RaraP11416 Gm25879-201ENSMUST00000104330 107 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm13457-201ENSMUST00000117885 267 ntBASIC4.8□□□□□ -1.64
RaraP11416 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.8□□□□□ -1.64
RaraP11416 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm26034-201ENSMUST00000158154 116 ntBASIC4.8□□□□□ -1.64
RaraP11416 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.8□□□□□ -1.64
RaraP11416 Mir6372-201ENSMUST00000185114 109 ntBASIC4.8□□□□□ -1.64
RaraP11416 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 Gm38080-201ENSMUST00000194035 268 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm43586-201ENSMUST00000195948 310 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm45007-201ENSMUST00000206237 366 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.8□□□□□ -1.64
RaraP11416 Gm45315-201ENSMUST00000209283 333 ntBASIC4.8□□□□□ -1.64
RaraP11416 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm2607-201ENSMUST00000212389 627 ntBASIC4.8□□□□□ -1.64
RaraP11416 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.8□□□□□ -1.64
RaraP11416 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.8□□□□□ -1.64
RaraP11416 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.8□□□□□ -1.64
RaraP11416 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RaraP11416 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RaraP11416 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RaraP11416 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms