Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Chmp6P0C0A3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Chmp6P0C0A3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Mir682-201ENSMUST00000102281 96 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm24122-201ENSMUST00000104107 132 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm24670-201ENSMUST00000104154 132 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm11490-201ENSMUST00000118128 272 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm12507-201ENSMUST00000119155 415 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm24840-201ENSMUST00000122603 147 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm25391-201ENSMUST00000157342 134 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm28802-201ENSMUST00000188624 944 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm38149-201ENSMUST00000191943 339 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm38281-201ENSMUST00000192301 315 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm38214-201ENSMUST00000192581 988 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm29920-201ENSMUST00000206876 754 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.75□□□□□ -1.97
Chmp6P0C0A3 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Gm22622-201ENSMUST00000082870 129 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Chmp6P0C0A3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.75□□□□□ -1.97
Chmp6P0C0A3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Mir542-201ENSMUST00000102186 85 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm14915-201ENSMUST00000120747 204 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm25808-201ENSMUST00000122784 284 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm22390-201ENSMUST00000157588 325 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm24532-201ENSMUST00000157951 286 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm3104-201ENSMUST00000171004 473 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm20648-201ENSMUST00000175815 328 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm24757-201ENSMUST00000176987 371 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm27869-201ENSMUST00000184327 122 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm45912-201ENSMUST00000210646 543 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Gm25008-201ENSMUST00000083809 81 ntBASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Chmp6P0C0A3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm24068-201ENSMUST00000104513 132 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm15936-201ENSMUST00000118706 460 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm14411-201ENSMUST00000121798 914 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm27582-201ENSMUST00000184084 126 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm44519-201ENSMUST00000206486 122 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm18729-201ENSMUST00000217230 621 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Chmp6P0C0A3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm2003-201ENSMUST00000118537 636 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm12793-201ENSMUST00000119268 292 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm11943-201ENSMUST00000119473 327 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm13581-201ENSMUST00000120675 278 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm22794-201ENSMUST00000157228 306 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm26101-201ENSMUST00000157246 105 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm24925-201ENSMUST00000178157 107 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Mir7013-201ENSMUST00000183540 72 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm9696-202ENSMUST00000191541 830 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Gm19147-201ENSMUST00000199622 652 ntBASIC2.72□□□□□ -1.97
Chmp6P0C0A3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms