Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm25270-201ENSMUST00000122606 138 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm24910-201ENSMUST00000157289 272 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm24418-201ENSMUST00000177597 79 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm24639-201ENSMUST00000178518 79 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm23076-201ENSMUST00000179082 79 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm25077-201ENSMUST00000179157 79 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col3a1P08121 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 Trbv7-201ENSMUST00000193339 402 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm44472-201ENSMUST00000204922 943 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 AC120540.1-201ENSMUST00000221879 324 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm42967-201ENSMUST00000198647 2312 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col3a1P08121 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Col3a1P08121 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm14918-201ENSMUST00000118153 268 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm24240-201ENSMUST00000157785 135 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Col3a1P08121 Gm17166-201ENSMUST00000172006 431 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm23003-201ENSMUST00000179948 107 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm29552-201ENSMUST00000190548 660 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm19599-201ENSMUST00000218898 358 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm21286-201ENSMUST00000098035 545 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.54□□□□□ -1.84
Col3a1P08121 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm42841-201ENSMUST00000199806 1932 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm7133-201ENSMUST00000187797 2039 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col3a1P08121 Mir499-201ENSMUST00000102357 79 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col3a1P08121 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col3a1P08121 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col3a1P08121 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Mir669g-201ENSMUST00000116809 123 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm15126-201ENSMUST00000118631 833 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm6587-201ENSMUST00000120219 613 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.53□□□□□ -1.84
Col3a1P08121 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm22076-201ENSMUST00000158601 84 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm16318-201ENSMUST00000162402 601 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.53□□□□□ -1.84
Col3a1P08121 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm28418-201ENSMUST00000186179 423 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm29148-201ENSMUST00000188140 336 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm28625-201ENSMUST00000188309 205 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm28788-201ENSMUST00000189717 375 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm29558-201ENSMUST00000190134 375 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm44409-201ENSMUST00000198810 166 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col3a1P08121 Gm46146-201ENSMUST00000217483 346 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm46193-201ENSMUST00000219399 364 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Gm46994-201ENSMUST00000221523 219 ntBASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col3a1P08121 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col3a1P08121 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Col3a1P08121 Gm18189-201ENSMUST00000218153 1951 ntBASIC3.52□□□□□ -1.85
Col3a1P08121 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Col3a1P08121 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Col3a1P08121 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col3a1P08121 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Col3a1P08121 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.52□□□□□ -1.85
Col3a1P08121 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Col3a1P08121 Gm13603-201ENSMUST00000119404 83 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms