Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Hcn3O88705 Gm25175-201ENSMUST00000178712 79 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hcn3O88705 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hcn3O88705 Gm37743-201ENSMUST00000194645 376 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm33354-201ENSMUST00000195448 906 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm43853-201ENSMUST00000197162 301 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm18971-201ENSMUST00000197240 374 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm42451-201ENSMUST00000197410 244 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.59□□□□□ -1.83
Hcn3O88705 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.59□□□□□ -1.83
Hcn3O88705 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hcn3O88705 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm22061-201ENSMUST00000082557 107 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm10242-201ENSMUST00000090064 330 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Mir452-201ENSMUST00000093629 85 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Gm10343-201ENSMUST00000096279 348 ntBASIC3.59□□□□□ -1.83
Hcn3O88705 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Hcn3O88705 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hcn3O88705 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hcn3O88705 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hcn3O88705 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.59□□□□□ -1.84
Hcn3O88705 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hcn3O88705 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Hcn3O88705 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hcn3O88705 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Hcn3O88705 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm11874-201ENSMUST00000117437 130 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm11931-201ENSMUST00000121630 447 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm6058-201ENSMUST00000154261 399 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm25335-201ENSMUST00000158043 103 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm27608-201ENSMUST00000184822 162 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm38050-201ENSMUST00000191904 238 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm38053-201ENSMUST00000193938 160 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm45252-201ENSMUST00000211579 397 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.58□□□□□ -1.84
Hcn3O88705 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Gm20102-201ENSMUST00000222445 220 ntBASIC3.58□□□□□ -1.84
Hcn3O88705 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Hcn3O88705 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hcn3O88705 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.58□□□□□ -1.84
Hcn3O88705 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm12252-201ENSMUST00000119517 219 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm16354-201ENSMUST00000155376 150 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm22108-201ENSMUST00000177961 106 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm24798-201ENSMUST00000179334 106 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm28141-201ENSMUST00000186676 342 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm28148-201ENSMUST00000186924 697 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.57□□□□□ -1.84
Hcn3O88705 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm7468-201ENSMUST00000203900 652 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm8745-201ENSMUST00000207846 782 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm18854-201ENSMUST00000211196 329 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.57□□□□□ -1.84
Hcn3O88705 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.57□□□□□ -1.84
Hcn3O88705 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm5548-201ENSMUST00000055878 397 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hcn3O88705 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Hcn3O88705 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm23627-201ENSMUST00000082459 107 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm22502-201ENSMUST00000082488 107 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm22977-201ENSMUST00000082615 107 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm24149-201ENSMUST00000082757 107 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 Gm26056-201ENSMUST00000083043 104 ntBASIC3.57□□□□□ -1.84
Hcn3O88705 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Hcn3O88705 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Hcn3O88705 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Hcn3O88705 Gm22269-201ENSMUST00000104002 130 ntBASIC3.56□□□□□ -1.84
Hcn3O88705 Gm12386-201ENSMUST00000117380 688 ntBASIC3.56□□□□□ -1.84
Hcn3O88705 Gm13873-201ENSMUST00000119208 427 ntBASIC3.56□□□□□ -1.84
Hcn3O88705 Gm12515-201ENSMUST00000120116 361 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms