Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm23602-201ENSMUST00000157258 132 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm22034-201ENSMUST00000157283 134 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm24713-201ENSMUST00000178850 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm21638-201ENSMUST00000179473 836 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm25448-201ENSMUST00000180065 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm24518-201ENSMUST00000180275 94 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm27580-201ENSMUST00000183666 149 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm19637-201ENSMUST00000185933 579 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm28843-201ENSMUST00000189198 678 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm29546-201ENSMUST00000191171 678 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm18956-201ENSMUST00000192857 480 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm38329-201ENSMUST00000193473 427 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm43814-201ENSMUST00000197851 413 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm34091-201ENSMUST00000200875 604 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm5322-201ENSMUST00000206142 699 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm19219-201ENSMUST00000215863 724 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.42□□□□□ -1.86
Cbx4O55187 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cbx4O55187 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Cbx4O55187 Snora7a-201ENSMUST00000082629 140 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm23515-201ENSMUST00000082829 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm23932-201ENSMUST00000082914 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm26055-201ENSMUST00000083038 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Snora70-201ENSMUST00000083047 137 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm25755-201ENSMUST00000083396 107 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Gm24765-201ENSMUST00000083691 103 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.42□□□□□ -1.86
Cbx4O55187 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Cbx4O55187 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cbx4O55187 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Cbx4O55187 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Cbx4O55187 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm13122-201ENSMUST00000118380 453 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm14694-201ENSMUST00000121856 282 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm22107-201ENSMUST00000122548 100 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.41□□□□□ -1.86
Cbx4O55187 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm22633-201ENSMUST00000179834 107 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm28030-201ENSMUST00000184987 138 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Mir6372-201ENSMUST00000185114 109 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm29134-201ENSMUST00000186579 126 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm28148-201ENSMUST00000186924 697 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm19641-201ENSMUST00000188432 417 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm28241-201ENSMUST00000190916 235 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm37568-201ENSMUST00000191755 364 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm43505-201ENSMUST00000200579 139 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm5001-201ENSMUST00000204361 331 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm45438-201ENSMUST00000210242 564 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.41□□□□□ -1.86
Cbx4O55187 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Olfr936-202ENSMUST00000216912 937 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.41□□□□□ -1.86
Cbx4O55187 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm18921-201ENSMUST00000221798 366 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm22287-201ENSMUST00000083197 107 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Mir323-201ENSMUST00000083683 86 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Gm5670-201ENSMUST00000093546 372 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Cbx4O55187 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.41□□□□□ -1.86
Cbx4O55187 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Cbx4O55187 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Cbx4O55187 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Cbx4O55187 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.4□□□□□ -1.86
Cbx4O55187 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Cbx4O55187 Gm24590-201ENSMUST00000116699 119 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Gm11576-201ENSMUST00000117433 417 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Gm12722-201ENSMUST00000118507 493 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.4□□□□□ -1.87
Cbx4O55187 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.4□□□□□ -1.87
Cbx4O55187 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Cbx4O55187 Gm7909-201ENSMUST00000182688 614 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms