Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm14748-201ENSMUST00000119819 411 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm11321-201ENSMUST00000121257 902 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm14564-201ENSMUST00000122159 294 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm26027-201ENSMUST00000122725 268 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm26105-201ENSMUST00000157253 190 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm3489-201ENSMUST00000190083 528 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm2719-201ENSMUST00000191929 444 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm18692-201ENSMUST00000193047 511 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm37732-201ENSMUST00000194377 316 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.76□□□□□ -2.13
Hmgb3O54879 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm43930-201ENSMUST00000203868 845 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm44966-201ENSMUST00000208096 157 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm45791-201ENSMUST00000212908 352 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm18338-201ENSMUST00000222381 560 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Hmgb3O54879 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Hmgb3O54879 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm24698-201ENSMUST00000083883 130 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.76□□□□□ -2.13
Hmgb3O54879 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm15159-201ENSMUST00000117062 764 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm9432-201ENSMUST00000117810 759 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm13806-201ENSMUST00000117822 325 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Mir3066-201ENSMUST00000175296 83 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Mir7578-201ENSMUST00000183455 82 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm27599-201ENSMUST00000183758 174 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Mir6371-201ENSMUST00000184470 111 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm43193-201ENSMUST00000197732 441 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm43901-201ENSMUST00000203247 453 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm44526-201ENSMUST00000204664 121 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm18414-201ENSMUST00000210858 694 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Gm2544-201ENSMUST00000222702 756 ntBASIC1.75□□□□□ -2.13
Hmgb3O54879 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Hmgb3O54879 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Hmgb3O54879 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
Hmgb3O54879 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26504-201ENSMUST00000102033 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm14363-201ENSMUST00000122304 409 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm14129-201ENSMUST00000122436 291 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24592-201ENSMUST00000122505 106 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm25153-201ENSMUST00000157118 156 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24857-201ENSMUST00000158061 310 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26502-201ENSMUST00000177732 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm25350-201ENSMUST00000177849 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm23446-201ENSMUST00000177977 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26201-201ENSMUST00000178047 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24711-201ENSMUST00000178062 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24609-201ENSMUST00000178166 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm23265-201ENSMUST00000178321 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm22812-201ENSMUST00000178329 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26246-201ENSMUST00000178388 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm25155-201ENSMUST00000178450 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm24760-201ENSMUST00000178530 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm22285-201ENSMUST00000178576 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm22776-201ENSMUST00000178634 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm22417-201ENSMUST00000178656 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm26270-201ENSMUST00000178690 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm23313-201ENSMUST00000178931 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.74□□□□□ -2.13
Hmgb3O54879 Gm23089-201ENSMUST00000178947 94 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms