Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm20039-201ENSMUST00000210329 394 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 Gm45772-201ENSMUST00000212961 240 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.14□□□□□ -1.59
NpcdF8VQB8 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 Gm21937-201ENSMUST00000222825 218 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.14□□□□□ -1.59
NpcdF8VQB8 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.14□□□□□ -1.59
NpcdF8VQB8 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NpcdF8VQB8 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm25764-201ENSMUST00000104092 134 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm25565-201ENSMUST00000104605 105 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm7308-201ENSMUST00000121087 447 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm23496-201ENSMUST00000157741 248 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm25718-201ENSMUST00000158632 118 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm16378-201ENSMUST00000179168 342 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm22263-201ENSMUST00000180060 104 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Mir6996-201ENSMUST00000183922 61 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm43286-201ENSMUST00000197420 424 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm2710-201ENSMUST00000073196 603 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NpcdF8VQB8 Gm12010-201ENSMUST00000122400 2017 ntBASIC5.13□□□□□ -1.59
NpcdF8VQB8 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm14296-202ENSMUST00000108931 750 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm15151-201ENSMUST00000117106 177 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm13439-201ENSMUST00000117541 409 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm13153-201ENSMUST00000120969 637 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm12087-201ENSMUST00000121878 258 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm26041-201ENSMUST00000158148 108 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm8114-201ENSMUST00000172225 484 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm25360-201ENSMUST00000178786 191 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm24168-201ENSMUST00000178825 107 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Mir6481-201ENSMUST00000184617 110 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm44879-201ENSMUST00000207007 503 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Mir34b-201ENSMUST00000083558 84 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Svet1-201ENSMUST00000209370 3940 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 BC051076-202ENSMUST00000199477 2868 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Gm44438-201ENSMUST00000204388 3236 ntBASIC5.12□□□□□ -1.59
NpcdF8VQB8 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm22590-201ENSMUST00000104247 128 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm15783-201ENSMUST00000117521 633 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm24664-201ENSMUST00000158939 100 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm28623-201ENSMUST00000187219 192 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm29704-201ENSMUST00000196011 253 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm45005-201ENSMUST00000206640 157 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm33654-201ENSMUST00000221704 215 ntBASIC5.11□□□□□ -1.59
NpcdF8VQB8 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NpcdF8VQB8 Gm23443-201ENSMUST00000082916 128 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms