Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm29754-201ENSMUST00000206269 358 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm10297-201ENSMUST00000207136 651 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trbv1A0A0B4J1G7 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir467h-201ENSMUST00000116759 121 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26473-201ENSMUST00000116763 127 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm2768-201ENSMUST00000121062 250 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm14841-201ENSMUST00000121067 758 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm12372-201ENSMUST00000121654 768 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm12368-201ENSMUST00000122251 434 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm13424-201ENSMUST00000122301 354 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26027-201ENSMUST00000122725 268 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22322-201ENSMUST00000157151 111 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25391-201ENSMUST00000157342 134 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26348-201ENSMUST00000157528 240 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22390-201ENSMUST00000157588 325 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm23268-201ENSMUST00000175494 78 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25360-201ENSMUST00000178786 191 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm17929-201ENSMUST00000186851 627 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm29192-201ENSMUST00000190942 377 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm19147-201ENSMUST00000199622 652 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15235-201ENSMUST00000200572 194 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm45438-201ENSMUST00000210242 564 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm7753-201ENSMUST00000221007 867 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir542-201ENSMUST00000102186 85 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir883a-201ENSMUST00000104824 76 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm12656-201ENSMUST00000118149 577 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm14867-201ENSMUST00000120156 866 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm14651-201ENSMUST00000147192 442 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22755-201ENSMUST00000157143 100 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22794-201ENSMUST00000157228 306 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24443-201ENSMUST00000157242 132 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm26215-201ENSMUST00000158584 139 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Mir7578-201ENSMUST00000183455 82 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm28412-201ENSMUST00000187243 177 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm28113-201ENSMUST00000188280 229 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm19224-201ENSMUST00000190477 793 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm6140-201ENSMUST00000192494 966 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm44395-201ENSMUST00000197056 153 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24350-202ENSMUST00000198309 132 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm46193-201ENSMUST00000219399 364 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm2544-201ENSMUST00000222702 756 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm22740-201ENSMUST00000083439 109 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.05□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm25466-201ENSMUST00000103995 132 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm24376-201ENSMUST00000104399 127 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm11219-201ENSMUST00000118565 358 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm15106-201ENSMUST00000119691 821 ntBASIC2.04□□□□□ -2.08
Trbv1A0A0B4J1G7 Gm16412-201ENSMUST00000121602 273 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms