Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm18729-201ENSMUST00000217230 621 ntBASIC2.54□□□□□ -2
Cldn9Q9Z0S7 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.54□□□□□ -2
Cldn9Q9Z0S7 Gm24622-201ENSMUST00000082619 162 ntBASIC2.54□□□□□ -2
Cldn9Q9Z0S7 Gm23847-201ENSMUST00000083829 110 ntBASIC2.54□□□□□ -2
Cldn9Q9Z0S7 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Cldn9Q9Z0S7 Gm23128-201ENSMUST00000104257 132 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm22072-201ENSMUST00000116850 121 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm11490-201ENSMUST00000118128 272 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm14989-201ENSMUST00000120497 207 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm26411-201ENSMUST00000157668 107 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm25373-201ENSMUST00000158156 115 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm22538-201ENSMUST00000158169 299 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Mir3103-201ENSMUST00000175474 67 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm23128-202ENSMUST00000196578 133 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm18982-201ENSMUST00000198118 529 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Gm22249-201ENSMUST00000082485 136 ntBASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Cldn9Q9Z0S7 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Cldn9Q9Z0S7 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
Cldn9Q9Z0S7 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm13329-201ENSMUST00000117063 265 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm2066-201ENSMUST00000118046 389 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm2318-201ENSMUST00000119623 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm13627-201ENSMUST00000119700 706 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm14069-201ENSMUST00000120815 229 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm11456-201ENSMUST00000121070 256 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm22853-201ENSMUST00000174974 131 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7438-201ENSMUST00000177664 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7408-201ENSMUST00000178014 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7386-201ENSMUST00000178020 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm3657-201ENSMUST00000178170 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7415-201ENSMUST00000178205 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7398-201ENSMUST00000178589 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7391-201ENSMUST00000178680 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm7375-201ENSMUST00000179232 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm3681-201ENSMUST00000179940 639 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm25528-201ENSMUST00000180264 132 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm27428-201ENSMUST00000184289 110 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm44615-201ENSMUST00000206548 358 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm44657-201ENSMUST00000208568 450 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm18252-203ENSMUST00000215855 757 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm25008-201ENSMUST00000083809 81 ntBASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cldn9Q9Z0S7 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm15936-201ENSMUST00000118706 460 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm5937-201ENSMUST00000119715 643 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm13424-201ENSMUST00000122301 354 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm42924-201ENSMUST00000197261 185 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm19709-201ENSMUST00000215403 482 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Cldn9Q9Z0S7 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Cldn9Q9Z0S7 Gm25213-201ENSMUST00000102388 113 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms