Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Scn11aQ9R053 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.13□□□□□ -2.07
Scn11aQ9R053 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.13□□□□□ -2.07
Scn11aQ9R053 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.13□□□□□ -2.07
Scn11aQ9R053 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC2.13□□□□□ -2.07
Scn11aQ9R053 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.13□□□□□ -2.07
Scn11aQ9R053 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.13□□□□□ -2.07
Scn11aQ9R053 Gm25755-201ENSMUST00000083396 107 ntBASIC2.13□□□□□ -2.07
Scn11aQ9R053 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Gm12230-201ENSMUST00000118301 454 ntBASIC2.12□□□□□ -2.07
Scn11aQ9R053 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.12□□□□□ -2.07
Scn11aQ9R053 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Gm44458-201ENSMUST00000196594 143 ntBASIC2.12□□□□□ -2.07
Scn11aQ9R053 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Scn11aQ9R053 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
Scn11aQ9R053 Gm12934-201ENSMUST00000119221 343 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Scn11aQ9R053 Gm24174-201ENSMUST00000158933 111 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 Gm17065-201ENSMUST00000165245 239 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Scn11aQ9R053 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.11□□□□□ -2.07
Scn11aQ9R053 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Scn11aQ9R053 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.11□□□□□ -2.07
Scn11aQ9R053 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Scn11aQ9R053 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Scn11aQ9R053 Mir7052-201ENSMUST00000184821 65 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Scn11aQ9R053 Gm17946-201ENSMUST00000186856 538 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Scn11aQ9R053 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.1□□□□□ -2.07
Scn11aQ9R053 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Scn11aQ9R053 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Gm5322-201ENSMUST00000206142 699 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 Olfr815-201ENSMUST00000071557 951 ntBASIC2.1□□□□□ -2.07
Scn11aQ9R053 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.09□□□□□ -2.07
Scn11aQ9R053 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Scn11aQ9R053 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm12294-201ENSMUST00000119723 490 ntBASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm5967-201ENSMUST00000172723 494 ntBASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.09□□□□□ -2.07
Scn11aQ9R053 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Scn11aQ9R053 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.09□□□□□ -2.08
Scn11aQ9R053 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm15526-201ENSMUST00000112504 204 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm13574-201ENSMUST00000120482 394 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm15115-201ENSMUST00000121145 264 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Scn11aQ9R053 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm12891-201ENSMUST00000119358 240 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm15452-201ENSMUST00000119877 240 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm22036-201ENSMUST00000157279 215 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm24154-201ENSMUST00000175261 130 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm27656-201ENSMUST00000185055 80 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm18433-201ENSMUST00000192747 197 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm36994-201ENSMUST00000192941 492 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Scn11aQ9R053 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Scn11aQ9R053 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.08□□□□□ -2.08
Scn11aQ9R053 Gm23760-201ENSMUST00000158350 116 ntBASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm23340-201ENSMUST00000158955 123 ntBASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm43431-201ENSMUST00000198577 340 ntBASIC2.07□□□□□ -2.08
Scn11aQ9R053 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.07□□□□□ -2.08
Scn11aQ9R053 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.07□□□□□ -2.08
Scn11aQ9R053 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Scn11aQ9R053 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Scn11aQ9R053 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm24280-201ENSMUST00000104237 134 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm14215-201ENSMUST00000120578 221 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm45034-201ENSMUST00000206831 482 ntBASIC2.06□□□□□ -2.08
Scn11aQ9R053 Gm7407-201ENSMUST00000208301 568 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 132.3 ms