Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm24886-201ENSMUST00000104384 123 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm7079-201ENSMUST00000119726 171 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Mir3083-201ENSMUST00000175377 64 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm24949-201ENSMUST00000183609 215 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm28640-201ENSMUST00000190918 550 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm19786-201ENSMUST00000222589 580 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 AC159188.1-201ENSMUST00000225198 526 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Snord59a-201ENSMUST00000082844 74 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Msh5Q9QUM7 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.62□□□□□ -1.51
Msh5Q9QUM7 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm23839-201ENSMUST00000116957 109 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm24441-201ENSMUST00000157235 281 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm24692-201ENSMUST00000157761 146 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm23280-201ENSMUST00000157905 139 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Mir7072-201ENSMUST00000184542 60 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Mir6372-201ENSMUST00000185114 109 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm7726-201ENSMUST00000206241 231 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm23042-201ENSMUST00000083866 101 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Msh5Q9QUM7 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm15493-201ENSMUST00000119461 528 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm26253-201ENSMUST00000122493 103 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm26084-201ENSMUST00000157903 104 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm23662-201ENSMUST00000158046 111 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm24731-201ENSMUST00000158227 131 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm24053-201ENSMUST00000158620 105 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm16557-201ENSMUST00000159182 191 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm25633-201ENSMUST00000178565 107 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm8419-201ENSMUST00000189886 412 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm10048-201ENSMUST00000194196 372 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm43264-201ENSMUST00000202284 325 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm9377-201ENSMUST00000207227 623 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm18015-201ENSMUST00000214879 316 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm4510-201ENSMUST00000218265 427 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Snord21-201ENSMUST00000082519 94 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm22805-201ENSMUST00000082739 107 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.6□□□□□ -1.51
Msh5Q9QUM7 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Msh5Q9QUM7 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms