Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm45696-201ENSMUST00000212088 985 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC158803.1-201ENSMUST00000219495 316 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm22979-201ENSMUST00000082609 159 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.51□□□□□ -2.01
Trem1Q9JKE2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm13640-201ENSMUST00000118445 264 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm15029-201ENSMUST00000119742 199 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm13482-201ENSMUST00000119842 254 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm12006-201ENSMUST00000120786 403 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm13913-201ENSMUST00000121126 260 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm14694-201ENSMUST00000121856 282 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm26020-201ENSMUST00000122729 183 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm23137-201ENSMUST00000157559 107 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm22186-201ENSMUST00000157822 122 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm22651-201ENSMUST00000157872 94 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm27220-201ENSMUST00000183453 262 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm7624-201ENSMUST00000209702 435 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm25147-201ENSMUST00000083030 105 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm24610-201ENSMUST00000083270 109 ntBASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.5□□□□□ -2.01
Trem1Q9JKE2 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Mir499-201ENSMUST00000102357 79 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm22151-201ENSMUST00000116963 58 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm43550-201ENSMUST00000200597 303 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm19252-201ENSMUST00000204705 305 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Trem1Q9JKE2 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm24581-201ENSMUST00000103962 133 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Mir467h-201ENSMUST00000116759 121 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm14594-201ENSMUST00000118052 537 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm14590-201ENSMUST00000118934 537 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm15760-201ENSMUST00000119553 283 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm15112-201ENSMUST00000120152 860 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm12723-201ENSMUST00000120700 451 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm6762-201ENSMUST00000121769 289 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm23867-201ENSMUST00000122649 274 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm26100-201ENSMUST00000157245 127 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm22530-201ENSMUST00000158820 118 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm8580-201ENSMUST00000160295 464 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm4540-201ENSMUST00000170669 429 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm14596-201ENSMUST00000180268 537 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm14595-201ENSMUST00000180335 537 ntBASIC2.48□□□□□ -2.01
Trem1Q9JKE2 Gm21489-201ENSMUST00000189668 818 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms