Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm14867-201ENSMUST00000120156 866 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm22849-201ENSMUST00000157713 307 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm23152-201ENSMUST00000175322 116 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm23186-201ENSMUST00000180078 107 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm28339-201ENSMUST00000185845 696 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm29062-201ENSMUST00000186032 694 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm8600-201ENSMUST00000186320 905 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm28057-201ENSMUST00000186603 615 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm28896-201ENSMUST00000188609 696 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm37433-201ENSMUST00000192695 678 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm37441-201ENSMUST00000194430 678 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm38107-201ENSMUST00000194873 696 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm44391-201ENSMUST00000198490 93 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm8041-201ENSMUST00000199755 616 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Gm10237-201ENSMUST00000078393 273 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim54Q9ERP3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm12125-201ENSMUST00000117261 736 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm14868-201ENSMUST00000117840 216 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm12902-201ENSMUST00000118389 322 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm24439-201ENSMUST00000157894 117 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm25361-201ENSMUST00000179358 76 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm10193-201ENSMUST00000188288 231 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm19089-201ENSMUST00000197207 613 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Snord35b-201ENSMUST00000082833 87 ntBASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim54Q9ERP3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm12878-201ENSMUST00000118744 332 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm9225-201ENSMUST00000121921 836 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Nron-204ENSMUST00000158971 370 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm9071-201ENSMUST00000165915 474 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm44011-201ENSMUST00000203336 394 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm45105-201ENSMUST00000207824 397 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 CT025526.1-201ENSMUST00000217327 267 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm46193-201ENSMUST00000219399 364 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 AF357428-201ENSMUST00000083815 69 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.73□□□□□ -1.81
Trim54Q9ERP3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Trim54Q9ERP3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm24118-201ENSMUST00000103972 126 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm22023-201ENSMUST00000104354 130 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm11784-201ENSMUST00000118568 474 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm12053-201ENSMUST00000119022 252 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Cfap61-214ENSMUST00000167179 183 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Mir5129-201ENSMUST00000174938 78 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Snord92-201ENSMUST00000175548 85 ntBASIC3.72□□□□□ -1.81
Trim54Q9ERP3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms