Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm6788-201ENSMUST00000166459 270 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm22776-201ENSMUST00000178634 94 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm23767-201ENSMUST00000179278 94 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm27532-201ENSMUST00000183726 113 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm27869-201ENSMUST00000184327 122 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm7675-201ENSMUST00000208828 686 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm22622-201ENSMUST00000082870 129 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.32□□□□□ -2.04
Lima1Q9ERG0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm13640-201ENSMUST00000118445 264 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm15936-201ENSMUST00000118706 460 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm12156-201ENSMUST00000119188 554 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm25270-201ENSMUST00000122606 138 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm25047-201ENSMUST00000122667 104 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm4916-201ENSMUST00000126139 642 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm22083-201ENSMUST00000157586 102 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm24922-201ENSMUST00000158511 102 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm20660-201ENSMUST00000177515 289 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm27522-201ENSMUST00000183949 230 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Mir6916-201ENSMUST00000184514 63 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm37037-201ENSMUST00000194475 424 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm46389-201ENSMUST00000223199 392 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm24817-201ENSMUST00000093672 105 ntBASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Lima1Q9ERG0 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm13082-201ENSMUST00000118877 561 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm23860-201ENSMUST00000179446 132 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm7634-201ENSMUST00000185778 553 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm18448-201ENSMUST00000186286 599 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm17929-201ENSMUST00000186851 627 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm29335-201ENSMUST00000188361 459 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm18982-201ENSMUST00000198118 529 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm7946-201ENSMUST00000203326 958 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm45226-201ENSMUST00000206602 288 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Platr25-208ENSMUST00000222602 939 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm24661-201ENSMUST00000083205 104 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Lima1Q9ERG0 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm24122-201ENSMUST00000104107 132 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm11575-201ENSMUST00000122243 228 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Mir6993-201ENSMUST00000184912 65 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm28779-201ENSMUST00000189678 323 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm44720-201ENSMUST00000206076 260 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Lima1Q9ERG0 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lima1Q9ERG0 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms