Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm26411-201ENSMUST00000157668 107 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm23387-201ENSMUST00000158586 107 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm23819-201ENSMUST00000158744 109 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm26365-201ENSMUST00000179177 94 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Mir6352-201ENSMUST00000184495 116 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.19□□□□□ -1.9
Scn4aQ9ER60 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm26080-201ENSMUST00000104069 131 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm15714-201ENSMUST00000117168 250 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm14879-201ENSMUST00000117308 507 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm14591-201ENSMUST00000120407 518 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm9001-201ENSMUST00000121642 399 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm16232-201ENSMUST00000162856 167 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm44274-201ENSMUST00000203417 256 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Gm44554-201ENSMUST00000208738 147 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Scn4aQ9ER60 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm16100-201ENSMUST00000120489 231 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm11430-201ENSMUST00000121317 217 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm7582-201ENSMUST00000160831 603 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm27668-201ENSMUST00000184188 120 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm27715-201ENSMUST00000184714 260 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm38281-201ENSMUST00000192301 315 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm43239-201ENSMUST00000200131 201 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm44076-201ENSMUST00000203072 520 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm43979-201ENSMUST00000203179 475 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Scn4aQ9ER60 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn4aQ9ER60 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm46194-201ENSMUST00000218136 320 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm23455-201ENSMUST00000083331 100 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm23104-201ENSMUST00000083722 104 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm37566-201ENSMUST00000192363 4355 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm25170-201ENSMUST00000104191 129 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm13868-201ENSMUST00000122411 294 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm25981-201ENSMUST00000157921 295 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm7346-201ENSMUST00000169661 476 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm22108-201ENSMUST00000177961 106 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm24798-201ENSMUST00000179334 106 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm6113-201ENSMUST00000180319 639 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm27326-201ENSMUST00000183504 95 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm18667-201ENSMUST00000186523 484 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm38231-201ENSMUST00000192030 347 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm30674-201ENSMUST00000214523 392 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 AC113031.2-201ENSMUST00000226132 579 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm24928-201ENSMUST00000083399 107 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm25897-201ENSMUST00000083709 107 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm23102-201ENSMUST00000083724 116 ntBASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn4aQ9ER60 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Scn4aQ9ER60 Mir294-201ENSMUST00000104710 84 ntBASIC3.15□□□□□ -1.91
Scn4aQ9ER60 Gm24666-201ENSMUST00000158937 167 ntBASIC3.15□□□□□ -1.91
Scn4aQ9ER60 Npn2-202ENSMUST00000189275 235 ntBASIC3.15□□□□□ -1.91
Scn4aQ9ER60 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.15□□□□□ -1.91
Scn4aQ9ER60 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms