Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm37119-201ENSMUST00000195691 389 ntBASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Gm46312-201ENSMUST00000220961 420 ntBASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Gm25005-201ENSMUST00000083812 156 ntBASIC2.3□□□□□ -2.04
Cpsf1Q9EPU4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Gm24840-201ENSMUST00000122603 147 ntBASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Mir6541-201ENSMUST00000183649 110 ntBASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Gm43991-201ENSMUST00000203751 274 ntBASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Mir320-201ENSMUST00000083594 82 ntBASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cpsf1Q9EPU4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm14537-201ENSMUST00000117464 599 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm14880-201ENSMUST00000117581 292 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm11350-201ENSMUST00000121436 870 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm22843-201ENSMUST00000157710 134 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm22716-201ENSMUST00000177596 107 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Gm38217-201ENSMUST00000194358 910 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Cpsf1Q9EPU4 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm13440-201ENSMUST00000121665 496 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm25831-201ENSMUST00000158924 163 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm8532-201ENSMUST00000179174 461 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm35570-201ENSMUST00000198730 681 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm45380-201ENSMUST00000210465 315 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cpsf1Q9EPU4 Gm26154-201ENSMUST00000102339 96 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Gm12731-201ENSMUST00000120932 268 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Gm24561-201ENSMUST00000175182 95 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Gm19089-201ENSMUST00000197207 613 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Gm19177-201ENSMUST00000204520 613 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Gm20039-201ENSMUST00000210329 394 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 BC022960-201ENSMUST00000119987 1815 ntBASIC2.26□□□□□ -2.05
Cpsf1Q9EPU4 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm15526-201ENSMUST00000112504 204 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm13424-201ENSMUST00000122301 354 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm25888-201ENSMUST00000157778 302 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm28650-201ENSMUST00000188413 411 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm13194-201ENSMUST00000142299 311 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm38281-201ENSMUST00000192301 315 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 AC105169.1-201ENSMUST00000218912 1294 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Cpsf1Q9EPU4 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm22149-201ENSMUST00000104442 136 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm5937-201ENSMUST00000119715 643 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm27326-201ENSMUST00000183504 95 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Mir6995-201ENSMUST00000183658 71 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm36994-201ENSMUST00000192941 492 ntBASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cpsf1Q9EPU4 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Gm7182-201ENSMUST00000193351 732 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.23□□□□□ -2.05
Cpsf1Q9EPU4 Gm15115-201ENSMUST00000121145 264 ntBASIC2.22□□□□□ -2.05
Cpsf1Q9EPU4 Gm27698-201ENSMUST00000184060 249 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms