Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Chmp2aQ9DB34 Gm10343-201ENSMUST00000096279 348 ntBASIC2.54□□□□□ -2
Chmp2aQ9DB34 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Chmp2aQ9DB34 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Chmp2aQ9DB34 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Chmp2aQ9DB34 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm22752-201ENSMUST00000102083 109 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm13087-201ENSMUST00000118298 256 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm14602-201ENSMUST00000118625 340 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm12706-201ENSMUST00000121588 698 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm22794-201ENSMUST00000157228 306 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm23033-201ENSMUST00000157996 134 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm22534-201ENSMUST00000158173 104 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm8676-201ENSMUST00000184206 637 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm42593-201ENSMUST00000198469 377 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm18268-201ENSMUST00000208445 943 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm5374-201ENSMUST00000222868 657 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chmp2aQ9DB34 Gm10038-201ENSMUST00000077233 441 ntBASIC2.53□□□□□ -2
Chmp2aQ9DB34 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
Chmp2aQ9DB34 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.53□□□□□ -2.01
Chmp2aQ9DB34 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm22782-201ENSMUST00000104082 132 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm15936-201ENSMUST00000118706 460 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm12238-201ENSMUST00000127764 124 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm16533-201ENSMUST00000140035 228 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm22390-201ENSMUST00000157588 325 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm24959-201ENSMUST00000157924 146 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm24552-201ENSMUST00000158646 103 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm16236-201ENSMUST00000159588 379 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm24816-201ENSMUST00000175311 151 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm29335-201ENSMUST00000188361 459 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm29389-201ENSMUST00000191562 352 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm43355-201ENSMUST00000196541 346 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm19202-201ENSMUST00000198096 808 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm45522-201ENSMUST00000210784 166 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Chmp2aQ9DB34 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm22936-201ENSMUST00000103955 126 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm14469-201ENSMUST00000118363 202 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm14669-201ENSMUST00000118841 250 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm14982-201ENSMUST00000121102 442 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm26101-201ENSMUST00000157246 105 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm24925-201ENSMUST00000178157 107 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm28744-201ENSMUST00000189939 340 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm43659-201ENSMUST00000200894 628 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Gm22005-201ENSMUST00000082795 141 ntBASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Chmp2aQ9DB34 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm13756-201ENSMUST00000117618 222 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm12640-201ENSMUST00000120097 310 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm14600-201ENSMUST00000121032 630 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm11471-201ENSMUST00000121824 198 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm24212-201ENSMUST00000158258 132 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Mir6372-201ENSMUST00000185114 109 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm44060-201ENSMUST00000204440 410 ntBASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.5□□□□□ -2.01
Chmp2aQ9DB34 Gm44903-201ENSMUST00000206840 130 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms