Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23587-201ENSMUST00000157658 84 ntBASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm42465-201ENSMUST00000197036 492 ntBASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm45687-201ENSMUST00000209454 155 ntBASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ccdc3Q9D6Y1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm24280-201ENSMUST00000104237 134 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22486-201ENSMUST00000116815 137 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm14579-201ENSMUST00000117068 283 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm22225-201ENSMUST00000157358 278 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm20450-201ENSMUST00000173652 147 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm27522-201ENSMUST00000183949 230 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm37979-201ENSMUST00000193065 712 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm18551-201ENSMUST00000195594 642 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm9632-201ENSMUST00000195934 643 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm9377-201ENSMUST00000207227 623 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm45023-201ENSMUST00000207951 379 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm44555-201ENSMUST00000209008 148 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Gm23096-201ENSMUST00000083447 107 ntBASIC2.34□□□□□ -2.03
Ccdc3Q9D6Y1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm14943-201ENSMUST00000118056 546 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm14982-201ENSMUST00000121102 442 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm11575-201ENSMUST00000122243 228 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm24212-201ENSMUST00000158258 132 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm17186-201ENSMUST00000171742 456 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm22264-201ENSMUST00000178200 107 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm7258-201ENSMUST00000179317 300 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm29330-201ENSMUST00000190032 699 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm28098-201ENSMUST00000191361 699 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm37576-201ENSMUST00000194228 372 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm17893-201ENSMUST00000203017 770 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm44332-201ENSMUST00000203712 433 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm5655-201ENSMUST00000221078 901 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm18617-201ENSMUST00000222311 259 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.33□□□□□ -2.04
Ccdc3Q9D6Y1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm9440-201ENSMUST00000119667 539 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm17072-201ENSMUST00000166673 658 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm28650-201ENSMUST00000188413 411 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm6060-201ENSMUST00000188671 251 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm28744-201ENSMUST00000189939 340 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm19498-201ENSMUST00000191128 331 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Mir344e-201ENSMUST00000104677 66 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm14940-201ENSMUST00000119309 495 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm43224-201ENSMUST00000201567 898 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 Gm4921-201ENSMUST00000219804 992 ntBASIC2.31□□□□□ -2.04
Ccdc3Q9D6Y1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 144.4 ms