Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm11835-201ENSMUST00000120635 663 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm13692-201ENSMUST00000120774 371 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm23206-201ENSMUST00000122720 184 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm22076-201ENSMUST00000158601 84 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm26866-201ENSMUST00000180414 802 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm27648-201ENSMUST00000184315 107 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Mir8106-201ENSMUST00000184520 139 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm27520-201ENSMUST00000184872 81 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm32340-201ENSMUST00000192883 259 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm37641-201ENSMUST00000193837 239 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm3442-201ENSMUST00000216808 710 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm22739-201ENSMUST00000083437 160 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm10212-201ENSMUST00000087884 324 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Vps28Q9D1C8 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Mir291a-201ENSMUST00000104815 82 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm11785-201ENSMUST00000120165 601 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm14562-201ENSMUST00000129885 543 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm24532-201ENSMUST00000157951 286 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm24713-201ENSMUST00000178850 107 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm25448-201ENSMUST00000180065 107 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm7329-201ENSMUST00000185915 210 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm37757-201ENSMUST00000193072 210 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm43582-201ENSMUST00000196149 343 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm44041-201ENSMUST00000203678 396 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm36776-201ENSMUST00000207006 203 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm44961-201ENSMUST00000207450 196 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm25856-201ENSMUST00000082786 75 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Vps28Q9D1C8 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.4□□□□□ -1.86
Vps28Q9D1C8 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Vps28Q9D1C8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm12370-201ENSMUST00000117809 604 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm13228-201ENSMUST00000118937 634 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm14581-201ENSMUST00000121726 198 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm6762-201ENSMUST00000121769 289 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm12368-201ENSMUST00000122251 434 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm16289-201ENSMUST00000162079 183 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Mir7047-201ENSMUST00000184595 64 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm37727-201ENSMUST00000191637 819 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm6510-201ENSMUST00000195916 574 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm44520-201ENSMUST00000205447 802 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Vps28Q9D1C8 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.4□□□□□ -1.87
Vps28Q9D1C8 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms