Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm21726-201ENSMUST00000179654 392 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Mir6383-201ENSMUST00000184545 116 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm19089-201ENSMUST00000197207 613 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm43804-201ENSMUST00000198280 456 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm19244-201ENSMUST00000204340 253 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm44118-201ENSMUST00000204665 229 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm44294-201ENSMUST00000205090 728 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm45245-201ENSMUST00000210082 376 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm23736-201ENSMUST00000082553 75 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm23645-201ENSMUST00000083228 108 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm25755-201ENSMUST00000083396 107 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.14□□□□□ -1.91
Ddx28Q9CWT6 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm9850-201ENSMUST00000117916 227 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm12722-201ENSMUST00000118507 493 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm11784-201ENSMUST00000118568 474 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm12458-201ENSMUST00000119387 495 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm25621-201ENSMUST00000157223 114 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm23592-201ENSMUST00000157859 117 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm28390-201ENSMUST00000185212 700 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm17946-201ENSMUST00000186856 538 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm28404-201ENSMUST00000190242 453 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm37568-201ENSMUST00000191755 364 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm38261-201ENSMUST00000192608 316 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm32447-201ENSMUST00000194265 697 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm44391-201ENSMUST00000198490 93 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm44425-201ENSMUST00000203739 429 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm45387-201ENSMUST00000209792 632 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm23925-201ENSMUST00000082471 132 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Mir323-201ENSMUST00000083683 86 ntBASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ddx28Q9CWT6 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm24581-201ENSMUST00000103962 133 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm13692-201ENSMUST00000120774 371 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm5958-201ENSMUST00000147698 297 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm23755-201ENSMUST00000157578 343 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm25860-201ENSMUST00000158252 126 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm24876-201ENSMUST00000158780 92 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm29413-201ENSMUST00000186019 880 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm29639-201ENSMUST00000188375 580 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm29330-201ENSMUST00000190032 699 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm28098-201ENSMUST00000191361 699 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm19032-201ENSMUST00000208584 592 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ddx28Q9CWT6 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm25272-201ENSMUST00000104293 128 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Mir1198-201ENSMUST00000116995 121 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm12125-201ENSMUST00000117261 736 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm9157-201ENSMUST00000117673 225 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm13076-201ENSMUST00000118041 204 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm11253-201ENSMUST00000118486 201 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm12156-201ENSMUST00000119188 554 ntBASIC3.11□□□□□ -1.91
Ddx28Q9CWT6 Gm8260-201ENSMUST00000119230 353 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms