Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm23265-201ENSMUST00000178321 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm22812-201ENSMUST00000178329 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26246-201ENSMUST00000178388 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm25155-201ENSMUST00000178450 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm24760-201ENSMUST00000178530 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm22285-201ENSMUST00000178576 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm22417-201ENSMUST00000178656 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26270-201ENSMUST00000178690 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm23313-201ENSMUST00000178931 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm23089-201ENSMUST00000178947 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm24153-201ENSMUST00000179280 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm25597-201ENSMUST00000179388 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm25816-201ENSMUST00000179764 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26188-201ENSMUST00000179963 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm26433-201ENSMUST00000180227 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm22128-201ENSMUST00000180346 94 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm28917-201ENSMUST00000187294 237 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm28766-201ENSMUST00000191086 234 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm32340-201ENSMUST00000192883 259 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm46146-201ENSMUST00000217483 346 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm23723-201ENSMUST00000082996 132 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm25755-201ENSMUST00000083396 107 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Mir137-201ENSMUST00000083635 73 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 AF357428-201ENSMUST00000083815 69 ntBASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Ccdc43Q9CR29 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm14657-201ENSMUST00000117461 302 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm15112-201ENSMUST00000120152 860 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm14363-201ENSMUST00000122304 409 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm22792-201ENSMUST00000157225 133 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm28666-201ENSMUST00000186649 274 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm28802-201ENSMUST00000188624 944 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm6060-201ENSMUST00000188671 251 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm28779-201ENSMUST00000189678 323 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Gm7422-201ENSMUST00000220115 640 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.24□□□□□ -1.89
Ccdc43Q9CR29 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm14940-201ENSMUST00000119309 495 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm12825-201ENSMUST00000120249 563 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm12045-201ENSMUST00000122122 573 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm14713-201ENSMUST00000122362 686 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm23213-201ENSMUST00000122715 313 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm25224-201ENSMUST00000158195 68 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Mir7658-201ENSMUST00000184043 57 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Mir8106-201ENSMUST00000184520 139 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm28956-201ENSMUST00000189047 427 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm37568-201ENSMUST00000191755 364 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm44254-201ENSMUST00000204184 322 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm9068-201ENSMUST00000217393 455 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Gm46103-201ENSMUST00000217614 341 ntBASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ccdc43Q9CR29 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Gm9009-201ENSMUST00000117321 326 ntBASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Gm13803-201ENSMUST00000117547 489 ntBASIC3.22□□□□□ -1.89
Ccdc43Q9CR29 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms