Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm13627-201ENSMUST00000119700 706 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm12876-201ENSMUST00000120975 408 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm12071-201ENSMUST00000121968 469 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm8676-201ENSMUST00000184206 637 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm28647-201ENSMUST00000188416 197 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm17935-201ENSMUST00000196649 772 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm44849-201ENSMUST00000207595 484 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm44966-201ENSMUST00000208096 157 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Gm24661-201ENSMUST00000083205 104 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Rpa3Q9CQ71 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm23472-201ENSMUST00000101806 191 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm22563-201ENSMUST00000157333 269 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm22390-201ENSMUST00000157588 325 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm23033-201ENSMUST00000157996 134 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm16326-201ENSMUST00000162843 414 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm17072-201ENSMUST00000166673 658 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm24497-201ENSMUST00000177868 191 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm22111-201ENSMUST00000178010 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm23687-201ENSMUST00000178664 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm24566-201ENSMUST00000179286 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm23305-201ENSMUST00000179342 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm26389-201ENSMUST00000179819 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm25939-201ENSMUST00000179876 191 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm22130-201ENSMUST00000179979 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm22393-201ENSMUST00000180153 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm25085-201ENSMUST00000180298 79 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm27161-201ENSMUST00000183960 562 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm18956-201ENSMUST00000192857 480 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm44083-201ENSMUST00000203114 337 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm43894-201ENSMUST00000203274 688 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm46389-201ENSMUST00000223199 392 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm23444-201ENSMUST00000082922 191 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.35□□□□□ -2.03
Rpa3Q9CQ71 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm12697-201ENSMUST00000118008 667 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm13082-201ENSMUST00000118877 561 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm13424-201ENSMUST00000122301 354 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm22083-201ENSMUST00000157586 102 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm26487-201ENSMUST00000158022 94 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm27522-201ENSMUST00000183949 230 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm38075-201ENSMUST00000191979 920 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.34□□□□□ -2.03
Rpa3Q9CQ71 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Rpa3Q9CQ71 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Rpa3Q9CQ71 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.34□□□□□ -2.04
Rpa3Q9CQ71 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm13880-201ENSMUST00000118421 474 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Mir3112-201ENSMUST00000175431 82 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm6590-201ENSMUST00000203343 687 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm7675-201ENSMUST00000208828 686 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm9174-201ENSMUST00000078149 255 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm25199-201ENSMUST00000083095 104 ntBASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.33□□□□□ -2.04
Rpa3Q9CQ71 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms