Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm22417-201ENSMUST00000178656 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26270-201ENSMUST00000178690 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23313-201ENSMUST00000178931 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm23089-201ENSMUST00000178947 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm24153-201ENSMUST00000179280 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm25597-201ENSMUST00000179388 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm25816-201ENSMUST00000179764 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26188-201ENSMUST00000179963 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm26433-201ENSMUST00000180227 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm22128-201ENSMUST00000180346 94 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Mir6353-201ENSMUST00000183596 113 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm27861-201ENSMUST00000183920 214 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm29045-201ENSMUST00000187278 698 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm29641-201ENSMUST00000188955 259 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm37692-201ENSMUST00000192633 232 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm37807-201ENSMUST00000194310 190 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm43493-201ENSMUST00000199837 202 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm43600-201ENSMUST00000202134 223 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm43901-201ENSMUST00000203247 453 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm45173-201ENSMUST00000206819 305 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm45400-201ENSMUST00000211603 653 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.49□□□□□ -2.01
Use1Q9CQ56 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm14751-201ENSMUST00000117693 222 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm13806-201ENSMUST00000117822 325 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm14918-201ENSMUST00000118153 268 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm13603-201ENSMUST00000119404 83 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm14101-201ENSMUST00000121502 473 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm13194-201ENSMUST00000142299 311 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm23754-201ENSMUST00000157576 63 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm24546-201ENSMUST00000158652 102 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm23704-201ENSMUST00000158844 340 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Mir5099-201ENSMUST00000175257 74 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm20673-201ENSMUST00000177167 430 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm5224-201ENSMUST00000183060 350 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Mir6541-201ENSMUST00000183649 110 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm44058-201ENSMUST00000204335 467 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm9370-201ENSMUST00000222787 609 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Use1Q9CQ56 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm22575-201ENSMUST00000082981 110 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Use1Q9CQ56 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.48□□□□□ -2.01
Use1Q9CQ56 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm22115-201ENSMUST00000103976 133 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm23923-201ENSMUST00000104108 133 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm24126-201ENSMUST00000104111 106 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm14879-201ENSMUST00000117308 507 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm14736-201ENSMUST00000121470 336 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm14564-201ENSMUST00000122159 294 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm14651-201ENSMUST00000147192 442 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm24138-201ENSMUST00000157572 114 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm23033-201ENSMUST00000157996 134 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm6788-201ENSMUST00000166459 270 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm23268-201ENSMUST00000175494 78 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm28439-201ENSMUST00000187714 876 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm6140-201ENSMUST00000192494 966 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm35570-201ENSMUST00000198730 681 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm45522-201ENSMUST00000210784 166 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Mir208a-201ENSMUST00000083498 83 ntBASIC2.47□□□□□ -2.01
Use1Q9CQ56 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Use1Q9CQ56 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Use1Q9CQ56 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms