Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Mir7j-201ENSMUST00000184427 122 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm29550-201ENSMUST00000185543 285 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm28597-201ENSMUST00000187664 666 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm6651-201ENSMUST00000189471 271 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm37550-201ENSMUST00000193230 463 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm38356-201ENSMUST00000194313 408 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm43884-201ENSMUST00000204251 559 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm44208-201ENSMUST00000205199 421 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm45344-201ENSMUST00000211610 341 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.85□□□□□ -1.79
Hdac9Q99N13 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.85□□□□□ -1.79
Hdac9Q99N13 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Mir883a-201ENSMUST00000104824 76 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm12935-201ENSMUST00000119352 246 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm12891-201ENSMUST00000119358 240 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm12045-201ENSMUST00000122122 573 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm3111-201ENSMUST00000167426 490 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm24819-201ENSMUST00000175094 166 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm18588-201ENSMUST00000177308 492 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm23186-201ENSMUST00000180078 107 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm27893-201ENSMUST00000184408 194 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Mir6372-201ENSMUST00000185114 109 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm28489-201ENSMUST00000186655 316 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm44223-201ENSMUST00000204854 114 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm19126-201ENSMUST00000207896 509 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm23932-201ENSMUST00000082914 107 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.84□□□□□ -1.79
Hdac9Q99N13 Gm336-201ENSMUST00000186376 1480 ntBASIC3.84□□□□□ -1.8
Hdac9Q99N13 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Hdac9Q99N13 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.84□□□□□ -1.8
Hdac9Q99N13 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Hdac9Q99N13 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Hdac9Q99N13 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm25967-201ENSMUST00000157168 147 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm22538-201ENSMUST00000158169 299 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm11392-201ENSMUST00000181419 710 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm27599-201ENSMUST00000183758 174 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Mir6916-201ENSMUST00000184514 63 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm29600-201ENSMUST00000188687 377 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm18015-201ENSMUST00000214879 316 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm23516-201ENSMUST00000093728 107 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.83□□□□□ -1.8
Hdac9Q99N13 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Hdac9Q99N13 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hdac9Q99N13 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm26423-201ENSMUST00000104277 128 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm14987-201ENSMUST00000117820 676 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.82□□□□□ -1.8
Hdac9Q99N13 Gm15466-201ENSMUST00000122299 333 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms