Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm9762-201ENSMUST00000036976 444 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm10038-201ENSMUST00000077233 441 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm10042-201ENSMUST00000079884 78 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Gm24292-201ENSMUST00000082888 107 ntBASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc28bQ8CEG5 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ccdc28bQ8CEG5 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm24831-201ENSMUST00000116778 126 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm14681-201ENSMUST00000118047 411 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm13454-201ENSMUST00000118166 483 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm11414-201ENSMUST00000121795 263 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm24901-201ENSMUST00000158125 110 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm21754-201ENSMUST00000177550 479 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm22584-201ENSMUST00000177935 92 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm38075-201ENSMUST00000191979 920 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19457-201ENSMUST00000200995 448 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm43026-201ENSMUST00000202972 325 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm45023-201ENSMUST00000207951 379 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm45380-201ENSMUST00000210465 315 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc28bQ8CEG5 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Mir667-201ENSMUST00000102441 92 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm12509-201ENSMUST00000118033 609 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm9308-201ENSMUST00000119073 448 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm14240-201ENSMUST00000120353 546 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm8840-201ENSMUST00000122454 386 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm25559-201ENSMUST00000157182 74 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm25163-201ENSMUST00000158905 104 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm8338-201ENSMUST00000163928 363 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm7654-201ENSMUST00000186738 683 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm29597-201ENSMUST00000188035 308 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm28404-201ENSMUST00000190242 453 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm37097-201ENSMUST00000193676 336 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm43652-201ENSMUST00000196219 675 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19126-201ENSMUST00000207896 509 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm18116-201ENSMUST00000220920 537 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19441-201ENSMUST00000221545 330 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ccdc28bQ8CEG5 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm14566-201ENSMUST00000118915 321 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm11512-201ENSMUST00000119669 663 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm12213-201ENSMUST00000119924 353 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm13210-201ENSMUST00000121483 273 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm15065-201ENSMUST00000121699 273 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm25784-201ENSMUST00000122524 81 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm24936-201ENSMUST00000122598 247 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm26477-201ENSMUST00000122617 323 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm23206-201ENSMUST00000122720 184 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm22722-201ENSMUST00000157467 132 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm25666-201ENSMUST00000157702 107 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm22833-201ENSMUST00000158292 132 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm8649-201ENSMUST00000181799 233 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm27477-201ENSMUST00000184649 143 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm8392-201ENSMUST00000185647 835 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm35931-201ENSMUST00000203931 448 ntBASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.06□□□□□ -1.92
Ccdc28bQ8CEG5 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms