Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.58□□□□□ -1.84
Nup88Q8CEC0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm12492-201ENSMUST00000117665 564 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm14751-201ENSMUST00000117693 222 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm14292-201ENSMUST00000118761 456 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm12803-201ENSMUST00000118907 821 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm12156-201ENSMUST00000119188 554 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm12748-201ENSMUST00000120763 504 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm22187-201ENSMUST00000157819 129 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm3111-201ENSMUST00000167426 490 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Mir3106-201ENSMUST00000175401 82 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm27796-201ENSMUST00000183863 261 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm28648-201ENSMUST00000190092 343 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm44208-201ENSMUST00000205199 421 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm30534-201ENSMUST00000217928 207 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Nup88Q8CEC0 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm13228-201ENSMUST00000118937 634 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm14428-201ENSMUST00000120408 822 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm22236-201ENSMUST00000157093 106 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm22390-201ENSMUST00000157588 325 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm22584-201ENSMUST00000177935 92 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm26297-201ENSMUST00000179464 132 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm27161-201ENSMUST00000183960 562 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Mir6916-201ENSMUST00000184514 63 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm28146-201ENSMUST00000185517 701 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm7675-201ENSMUST00000208828 686 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nup88Q8CEC0 Gm37630-201ENSMUST00000194210 1456 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm25088-201ENSMUST00000101803 79 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm23402-201ENSMUST00000178130 107 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm25198-201ENSMUST00000178574 110 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Mir6382-201ENSMUST00000184055 110 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm28628-201ENSMUST00000187006 264 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm28629-201ENSMUST00000187309 263 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm45023-201ENSMUST00000207951 379 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm30674-201ENSMUST00000214523 392 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm22304-201ENSMUST00000082688 129 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm23850-201ENSMUST00000083830 169 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.55□□□□□ -1.84
Nup88Q8CEC0 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm22591-201ENSMUST00000104243 106 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm22072-201ENSMUST00000116850 121 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm14518-201ENSMUST00000117351 542 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm13504-201ENSMUST00000117490 316 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm14594-201ENSMUST00000118052 537 ntBASIC3.54□□□□□ -1.84
Nup88Q8CEC0 Gm14590-201ENSMUST00000118934 537 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms