Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm24190-201ENSMUST00000157976 216 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm27760-201ENSMUST00000185048 114 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm29330-201ENSMUST00000190032 699 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm28098-201ENSMUST00000191361 699 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm44254-201ENSMUST00000204184 322 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm44594-201ENSMUST00000208982 407 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm4921-201ENSMUST00000219804 992 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm2446-201ENSMUST00000220144 772 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm32300-201ENSMUST00000221735 515 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Mir463-201ENSMUST00000093570 75 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.19□□□□□ -1.9
Ccdc38Q8CDN8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm3104-201ENSMUST00000171004 473 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Snord93-201ENSMUST00000175580 71 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm26991-201ENSMUST00000180950 620 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm38075-201ENSMUST00000191979 920 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm37692-201ENSMUST00000192633 232 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm43004-201ENSMUST00000201872 703 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm44208-201ENSMUST00000205199 421 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm45382-201ENSMUST00000210607 151 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm45522-201ENSMUST00000210784 166 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm22507-201ENSMUST00000082773 160 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc38Q8CDN8 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm15272-201ENSMUST00000120865 233 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm25107-201ENSMUST00000122472 129 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm6265-201ENSMUST00000149263 231 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm22322-201ENSMUST00000157151 111 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm24876-201ENSMUST00000158780 92 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm18520-201ENSMUST00000174783 658 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Zfp950-206ENSMUST00000178819 171 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm45588-201ENSMUST00000211213 630 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc38Q8CDN8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Snord14c-201ENSMUST00000101927 86 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm22225-201ENSMUST00000157358 278 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm23865-201ENSMUST00000157723 97 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm3221-201ENSMUST00000164869 440 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm17054-201ENSMUST00000169811 259 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm7858-201ENSMUST00000190177 622 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm19224-201ENSMUST00000190477 793 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm18956-201ENSMUST00000192857 480 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm45023-201ENSMUST00000207951 379 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 AC168880.1-201ENSMUST00000225113 707 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm25582-201ENSMUST00000083412 110 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.16□□□□□ -1.9
Ccdc38Q8CDN8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Ccdc38Q8CDN8 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Ccdc38Q8CDN8 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.15□□□□□ -1.9
Ccdc38Q8CDN8 Gm26002-201ENSMUST00000101915 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms