Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm23733-201ENSMUST00000083750 106 ntBASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc40Q8BI79 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Mir883a-201ENSMUST00000104824 76 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm26473-201ENSMUST00000116763 127 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm22488-201ENSMUST00000116811 127 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm14841-201ENSMUST00000121067 758 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm14506-201ENSMUST00000121165 536 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm14363-201ENSMUST00000122304 409 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm21893-201ENSMUST00000179119 397 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm26991-201ENSMUST00000180950 620 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm27608-201ENSMUST00000184822 162 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm44157-201ENSMUST00000204720 410 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm23650-201ENSMUST00000083355 70 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Gm23847-201ENSMUST00000083829 110 ntBASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc40Q8BI79 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Mir542-201ENSMUST00000102186 85 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Mir673-201ENSMUST00000102361 91 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm13806-201ENSMUST00000117822 325 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm14594-201ENSMUST00000118052 537 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm14590-201ENSMUST00000118934 537 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm14389-201ENSMUST00000140453 241 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm23168-201ENSMUST00000157156 143 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm25283-201ENSMUST00000157272 77 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm22563-201ENSMUST00000157333 269 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm23704-201ENSMUST00000158844 340 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm6395-201ENSMUST00000167639 691 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm14596-201ENSMUST00000180268 537 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm14595-201ENSMUST00000180335 537 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm38213-201ENSMUST00000193203 173 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm15235-201ENSMUST00000200572 194 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm44594-201ENSMUST00000208982 407 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.01□□□□□ -1.93
Ccdc40Q8BI79 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm22939-201ENSMUST00000103958 131 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm26341-201ENSMUST00000104561 134 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm14901-201ENSMUST00000119001 283 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm12935-201ENSMUST00000119352 246 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm6071-201ENSMUST00000119561 440 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm23213-201ENSMUST00000122715 313 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm26275-201ENSMUST00000157101 268 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm24475-201ENSMUST00000157435 143 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm23588-201ENSMUST00000157659 99 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm23032-201ENSMUST00000157995 107 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm26005-201ENSMUST00000158802 134 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm25476-201ENSMUST00000175125 185 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm44615-201ENSMUST00000206548 358 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm45551-201ENSMUST00000211459 928 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3□□□□□ -1.93
Ccdc40Q8BI79 AC167669.3-201ENSMUST00000224720 393 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3□□□□□ -1.93
Ccdc40Q8BI79 Mir323-201ENSMUST00000083683 86 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm16261-201ENSMUST00000096813 205 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Ccdc40Q8BI79 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Gm37999-201ENSMUST00000195178 1809 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3□□□□□ -1.93
Ccdc40Q8BI79 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Ccdc40Q8BI79 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms