Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm23016-201ENSMUST00000158431 62 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm24552-201ENSMUST00000158646 103 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm25748-201ENSMUST00000175487 70 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Mir7047-201ENSMUST00000184595 64 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm18540-201ENSMUST00000204025 526 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm7751-201ENSMUST00000212868 709 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm22061-201ENSMUST00000082557 107 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm381-201ENSMUST00000117443 2037 ntBASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ubfd1Q78JW9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ubfd1Q78JW9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ubfd1Q78JW9 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm25727-201ENSMUST00000104522 131 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm12458-201ENSMUST00000119387 495 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm11785-201ENSMUST00000120165 601 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm11384-201ENSMUST00000121376 303 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm23435-201ENSMUST00000157183 156 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm24244-201ENSMUST00000157317 130 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm25434-201ENSMUST00000158278 167 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm20543-201ENSMUST00000174200 726 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Mir6338-201ENSMUST00000183389 109 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm37743-201ENSMUST00000194645 376 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm10264-201ENSMUST00000220589 429 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm23736-201ENSMUST00000082553 75 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Snord15a-201ENSMUST00000083888 148 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm22868-201ENSMUST00000083955 164 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ubfd1Q78JW9 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm24976-201ENSMUST00000158972 135 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm29335-201ENSMUST00000188361 459 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm28090-201ENSMUST00000189458 664 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm37455-201ENSMUST00000191993 529 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm19726-201ENSMUST00000205008 240 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm45245-201ENSMUST00000210082 376 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 AC117656.1-201ENSMUST00000225826 339 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm22364-201ENSMUST00000083097 98 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm24765-201ENSMUST00000083691 103 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.64□□□□□ -1.83
Ubfd1Q78JW9 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.63□□□□□ -1.83
Ubfd1Q78JW9 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ubfd1Q78JW9 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ubfd1Q78JW9 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Ubfd1Q78JW9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ubfd1Q78JW9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 121.8 ms