Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm13574-201ENSMUST00000120482 394 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm9613-201ENSMUST00000171662 196 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm19123-201ENSMUST00000190716 651 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm45192-201ENSMUST00000206749 283 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm20304-201ENSMUST00000218168 444 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Topbp1Q6ZQF0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm24984-201ENSMUST00000104454 133 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm15106-201ENSMUST00000119691 821 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm5937-201ENSMUST00000119715 643 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm9785-202ENSMUST00000144563 593 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm44011-201ENSMUST00000203336 394 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gm44266-201ENSMUST00000205235 500 ntBASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Topbp1Q6ZQF0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Gm11438-201ENSMUST00000121582 189 ntBASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Topbp1Q6ZQF0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm13913-201ENSMUST00000121126 260 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm13366-201ENSMUST00000122198 970 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm9022-202ENSMUST00000183285 483 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm28163-201ENSMUST00000187099 325 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Topbp1Q6ZQF0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm20526-201ENSMUST00000173416 158 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm26652-202ENSMUST00000181672 475 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm27155-201ENSMUST00000183716 898 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm29553-201ENSMUST00000189692 279 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm45687-201ENSMUST00000209454 155 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Gm45445-201ENSMUST00000209586 232 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.37□□□□□ -2.03
Topbp1Q6ZQF0 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm26473-201ENSMUST00000116763 127 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm25669-201ENSMUST00000157699 112 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm15143-201ENSMUST00000178180 714 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm25198-201ENSMUST00000178574 110 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Mir7665-201ENSMUST00000184907 63 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm28200-201ENSMUST00000187778 315 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm29378-201ENSMUST00000188723 315 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm28909-201ENSMUST00000189406 315 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm42465-201ENSMUST00000197036 492 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm45034-201ENSMUST00000206831 482 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Snord104-201ENSMUST00000083192 70 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Gm23347-201ENSMUST00000083823 82 ntBASIC2.36□□□□□ -2.03
Topbp1Q6ZQF0 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 Gm11268-201ENSMUST00000118347 267 ntBASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 Gm24319-201ENSMUST00000083389 107 ntBASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Topbp1Q6ZQF0 Gm19335-201ENSMUST00000195836 2069 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm25496-201ENSMUST00000104430 120 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm12432-201ENSMUST00000119540 186 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm27025-201ENSMUST00000182392 942 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm43431-201ENSMUST00000198577 340 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm44718-201ENSMUST00000206886 359 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Gm25796-201ENSMUST00000082645 163 ntBASIC2.34□□□□□ -2.03
Topbp1Q6ZQF0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms