Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm4987-201ENSMUST00000078326 408 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Rnf220Q6PDX6 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Rnf220Q6PDX6 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Rnf220Q6PDX6 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.9□□□□□ -1.78
Rnf220Q6PDX6 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.9□□□□□ -1.78
Rnf220Q6PDX6 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Mir92b-201ENSMUST00000102300 83 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm14897-201ENSMUST00000118213 207 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm22957-201ENSMUST00000122511 123 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm24839-201ENSMUST00000122602 107 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm24635-201ENSMUST00000122712 128 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm25220-201ENSMUST00000157546 95 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm26414-201ENSMUST00000157674 269 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm26034-201ENSMUST00000158154 116 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm23053-201ENSMUST00000175136 96 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm36964-201ENSMUST00000191876 198 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm43406-201ENSMUST00000200356 334 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm9818-201ENSMUST00000050900 255 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm25475-201ENSMUST00000082825 180 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.9□□□□□ -1.79
Rnf220Q6PDX6 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm22020-201ENSMUST00000104358 136 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm7327-201ENSMUST00000120925 652 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm13419-201ENSMUST00000121711 271 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm12087-201ENSMUST00000121878 258 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm26149-201ENSMUST00000157432 108 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm17186-201ENSMUST00000171742 456 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm27520-201ENSMUST00000184872 81 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm7329-201ENSMUST00000185915 210 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm37128-201ENSMUST00000192599 232 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm37889-201ENSMUST00000194174 251 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm44373-201ENSMUST00000196112 169 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm43724-201ENSMUST00000197516 226 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 AC132437.1-201ENSMUST00000218308 320 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Gm25207-201ENSMUST00000093745 107 ntBASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rnf220Q6PDX6 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm22899-201ENSMUST00000104540 131 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm14518-201ENSMUST00000117351 542 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm22479-201ENSMUST00000122566 81 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm28008-201ENSMUST00000184021 186 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm8600-201ENSMUST00000186320 905 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm8599-201ENSMUST00000193033 457 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm44446-201ENSMUST00000204864 255 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm45119-201ENSMUST00000207612 199 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm45273-201ENSMUST00000211559 281 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm45704-201ENSMUST00000212582 403 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Mir10a-201ENSMUST00000083585 110 ntBASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rnf220Q6PDX6 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms