Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm22780-201ENSMUST00000104084 132 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm24656-201ENSMUST00000177548 132 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm11392-201ENSMUST00000181419 710 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Mir8118-201ENSMUST00000183962 129 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm18991-201ENSMUST00000209225 746 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm6012-201ENSMUST00000210821 730 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 AC165415.1-201ENSMUST00000228924 273 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm12721-201ENSMUST00000120621 268 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.31□□□□□ -2.2
Col7a1Q63870 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC1.31□□□□□ -2.2
Col7a1Q63870 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Col7a1Q63870 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Col7a1Q63870 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm28500-201ENSMUST00000190286 151 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm43659-201ENSMUST00000200894 628 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm43979-201ENSMUST00000203179 475 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm43978-201ENSMUST00000203491 451 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm31532-201ENSMUST00000203555 767 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.3□□□□□ -2.2
Col7a1Q63870 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Col7a1Q63870 Gm25759-201ENSMUST00000103988 129 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm7209-201ENSMUST00000122339 333 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm37708-201ENSMUST00000192337 895 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm43510-201ENSMUST00000197922 353 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm43739-201ENSMUST00000198294 307 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.29□□□□□ -2.2
Col7a1Q63870 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm7065-201ENSMUST00000222150 474 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Col7a1Q63870 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm15933-201ENSMUST00000117215 616 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm7123-201ENSMUST00000117647 213 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm19932-201ENSMUST00000177033 313 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm27921-201ENSMUST00000183968 108 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm37119-201ENSMUST00000195691 389 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm35931-201ENSMUST00000203931 448 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.29□□□□□ -2.2
Col7a1Q63870 AC124549.2-201ENSMUST00000224243 222 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm6112-201ENSMUST00000208037 629 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm10794-201ENSMUST00000099624 207 ntBASIC1.29□□□□□ -2.2
Col7a1Q63870 Gm10997-201ENSMUST00000210294 1500 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Col7a1Q63870 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm23893-201ENSMUST00000158106 134 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Mir7063-201ENSMUST00000184158 91 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm37778-201ENSMUST00000191732 190 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.28□□□□□ -2.2
Col7a1Q63870 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm23435-201ENSMUST00000157183 156 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm8292-201ENSMUST00000162574 396 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm19233-201ENSMUST00000219772 936 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm10212-201ENSMUST00000087884 324 ntBASIC1.28□□□□□ -2.2
Col7a1Q63870 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm12383-201ENSMUST00000120628 760 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm12372-201ENSMUST00000121654 768 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Col7a1Q63870 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 AC156559.1-201ENSMUST00000224158 222 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm25279-201ENSMUST00000122608 133 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm19791-201ENSMUST00000180398 859 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm29263-201ENSMUST00000188718 463 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm28384-201ENSMUST00000189079 463 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm44277-201ENSMUST00000205128 649 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC1.27□□□□□ -2.21
Col7a1Q63870 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.27□□□□□ -2.21
Col7a1Q63870 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Col7a1Q63870 Gm24381-201ENSMUST00000122697 104 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm17164-201ENSMUST00000169013 506 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm44478-201ENSMUST00000204875 114 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm24313-201ENSMUST00000082561 133 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm22423-201ENSMUST00000082861 184 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm22416-201ENSMUST00000158590 88 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm25119-201ENSMUST00000158815 88 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm23702-201ENSMUST00000158840 130 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm24174-201ENSMUST00000158933 111 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm18953-201ENSMUST00000175694 300 ntBASIC1.26□□□□□ -2.21
Col7a1Q63870 Gm19641-201ENSMUST00000188432 417 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms