Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ctr9Q62018 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.38□□□□□ -1.87
Ctr9Q62018 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ctr9Q62018 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm12492-201ENSMUST00000117665 564 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm15312-201ENSMUST00000118827 271 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm15309-201ENSMUST00000121644 240 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm16363-201ENSMUST00000132460 877 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm23167-201ENSMUST00000157155 103 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm8338-201ENSMUST00000163928 363 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm20415-201ENSMUST00000172877 423 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Mir6916-201ENSMUST00000184514 63 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm27700-201ENSMUST00000185003 81 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm38076-201ENSMUST00000193889 450 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm43521-201ENSMUST00000197838 255 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm43107-201ENSMUST00000198729 255 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm44718-201ENSMUST00000206886 359 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm45658-201ENSMUST00000209197 580 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm46233-201ENSMUST00000217831 449 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Ctr9Q62018 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Mir883a-201ENSMUST00000104824 76 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm12803-201ENSMUST00000118907 821 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm14627-201ENSMUST00000118931 567 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm6587-201ENSMUST00000120219 613 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm11321-201ENSMUST00000121257 902 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm22521-201ENSMUST00000158272 134 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Mir3965-201ENSMUST00000175570 69 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm25873-201ENSMUST00000180317 107 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm27676-201ENSMUST00000183669 61 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm29597-201ENSMUST00000188035 308 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm1833-201ENSMUST00000191608 682 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm38329-201ENSMUST00000193473 427 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm42805-201ENSMUST00000196158 276 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm10038-201ENSMUST00000077233 441 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm24611-201ENSMUST00000083272 107 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Gm23850-201ENSMUST00000083830 169 ntBASIC3.36□□□□□ -1.87
Ctr9Q62018 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Ctr9Q62018 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm22591-201ENSMUST00000104243 106 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm12393-201ENSMUST00000117084 848 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm15272-201ENSMUST00000120865 233 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm23213-201ENSMUST00000122715 313 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm22769-201ENSMUST00000158367 98 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm7582-201ENSMUST00000160831 603 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm28623-201ENSMUST00000187219 192 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm37817-201ENSMUST00000195276 434 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm29754-201ENSMUST00000206269 358 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm45273-201ENSMUST00000211559 281 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.35□□□□□ -1.87
Ctr9Q62018 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm31849-201ENSMUST00000220306 375 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.35□□□□□ -1.87
Ctr9Q62018 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ctr9Q62018 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.35□□□□□ -1.87
Ctr9Q62018 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Ctr9Q62018 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ctr9Q62018 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ctr9Q62018 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ctr9Q62018 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.34□□□□□ -1.87
Ctr9Q62018 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.34□□□□□ -1.87
Ctr9Q62018 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.34□□□□□ -1.87
Ctr9Q62018 Gm11219-201ENSMUST00000118565 358 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms