Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CtcfQ61164 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CtcfQ61164 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CtcfQ61164 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
CtcfQ61164 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm14537-201ENSMUST00000117464 599 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm15783-201ENSMUST00000117521 633 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm12335-201ENSMUST00000119738 327 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm16428-201ENSMUST00000121193 723 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm5958-201ENSMUST00000147698 297 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm22491-201ENSMUST00000157190 102 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm25334-201ENSMUST00000158036 110 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm22840-201ENSMUST00000158444 136 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm25198-201ENSMUST00000178574 110 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm28314-201ENSMUST00000191276 345 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Trbv24-201ENSMUST00000194614 347 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm19244-201ENSMUST00000204340 253 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.75□□□□□ -1.81
CtcfQ61164 Gm31849-201ENSMUST00000220306 375 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.75□□□□□ -1.81
CtcfQ61164 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Gm10038-201ENSMUST00000077233 441 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.75□□□□□ -1.81
CtcfQ61164 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
CtcfQ61164 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CtcfQ61164 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CtcfQ61164 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 Gm23691-201ENSMUST00000101878 107 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm22497-201ENSMUST00000104499 131 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm14670-201ENSMUST00000117327 337 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm11490-201ENSMUST00000118128 272 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm6923-201ENSMUST00000118343 406 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.74□□□□□ -1.81
CtcfQ61164 Gm22521-201ENSMUST00000158272 134 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm26402-201ENSMUST00000158499 113 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm20415-201ENSMUST00000172877 423 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm20542-201ENSMUST00000174582 372 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm26701-201ENSMUST00000181571 234 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm17946-201ENSMUST00000186856 538 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm29452-201ENSMUST00000187996 313 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Gm28860-201ENSMUST00000188103 313 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CtcfQ61164 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 AC125020.2-201ENSMUST00000218894 348 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CtcfQ61164 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
CtcfQ61164 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CtcfQ61164 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CtcfQ61164 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CtcfQ61164 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CtcfQ61164 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CtcfQ61164 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.74□□□□□ -1.81
CtcfQ61164 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.74□□□□□ -1.81
CtcfQ61164 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CtcfQ61164 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm15175-201ENSMUST00000117629 132 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm7123-201ENSMUST00000117647 213 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm12458-201ENSMUST00000119387 495 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm12515-201ENSMUST00000120116 361 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm14366-201ENSMUST00000121970 730 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm23463-201ENSMUST00000122468 99 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm17919-201ENSMUST00000173344 312 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm24968-201ENSMUST00000179817 107 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm23648-201ENSMUST00000180301 107 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm27676-201ENSMUST00000183669 61 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm27599-201ENSMUST00000183758 174 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.73□□□□□ -1.81
CtcfQ61164 Gm28148-201ENSMUST00000186924 697 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm10193-201ENSMUST00000188288 231 ntBASIC3.73□□□□□ -1.81
CtcfQ61164 Gm28151-201ENSMUST00000189404 951 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms