Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm25833-201ENSMUST00000104137 133 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm23128-201ENSMUST00000104257 132 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm14899-201ENSMUST00000118673 548 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm13555-201ENSMUST00000121668 319 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm13007-201ENSMUST00000121866 365 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm23792-201ENSMUST00000122557 93 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm24937-201ENSMUST00000122597 134 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm25280-201ENSMUST00000157269 101 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm22315-201ENSMUST00000158010 143 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Mir5129-201ENSMUST00000174938 78 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm28453-203ENSMUST00000187041 189 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm18956-201ENSMUST00000192857 480 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm8023-201ENSMUST00000195298 903 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm23128-202ENSMUST00000196578 133 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm43264-201ENSMUST00000202284 325 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm44585-201ENSMUST00000207150 607 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 AC168266.1-201ENSMUST00000216024 226 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm29809-201ENSMUST00000218423 493 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Gm23736-201ENSMUST00000082553 75 ntBASIC1.28□□□□□ -2.2
Trav3-1Q5R1I8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm24118-201ENSMUST00000103972 126 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm17204-201ENSMUST00000167936 478 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm7346-201ENSMUST00000169661 476 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Mir7215-201ENSMUST00000200383 51 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm44259-201ENSMUST00000204996 298 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm18789-201ENSMUST00000216115 550 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm46146-201ENSMUST00000217483 346 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm46234-201ENSMUST00000218702 259 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
Trav3-1Q5R1I8 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Snord66-201ENSMUST00000104051 75 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm25272-201ENSMUST00000104293 128 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm13756-201ENSMUST00000117618 222 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm14352-201ENSMUST00000119250 449 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm6071-201ENSMUST00000119561 440 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm14534-201ENSMUST00000120045 357 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm11786-201ENSMUST00000120799 155 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm14840-201ENSMUST00000122135 594 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 n-R5s179-201ENSMUST00000122564 118 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm22613-201ENSMUST00000122679 292 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm4916-201ENSMUST00000126139 642 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm25335-201ENSMUST00000158043 103 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm21737-201ENSMUST00000178112 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm21729-201ENSMUST00000180058 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm21853-201ENSMUST00000180071 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm20901-201ENSMUST00000180177 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29073-201ENSMUST00000185563 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29495-201ENSMUST00000189319 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm28090-201ENSMUST00000189458 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm21647-201ENSMUST00000189755 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29165-201ENSMUST00000190655 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29524-201ENSMUST00000190819 699 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29523-201ENSMUST00000191415 699 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm29211-201ENSMUST00000191470 664 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm36891-201ENSMUST00000191995 655 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm37000-201ENSMUST00000193058 428 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm37288-201ENSMUST00000193963 334 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm36943-201ENSMUST00000194422 282 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm17987-201ENSMUST00000206902 603 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm2436-201ENSMUST00000219562 774 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav3-1Q5R1I8 Gm22806-201ENSMUST00000082738 136 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms