Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 AC131029.2-202ENSMUST00000228430 496 ntBASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav5d-4Q5R1F6 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm14794-201ENSMUST00000118181 192 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm12793-201ENSMUST00000119268 292 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm11556-201ENSMUST00000120751 288 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm17064-201ENSMUST00000167690 452 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm24816-201ENSMUST00000175311 151 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm27220-201ENSMUST00000183453 262 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm28399-201ENSMUST00000186221 318 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm28572-201ENSMUST00000187444 318 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm20915-201ENSMUST00000191575 663 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Mir7232-201ENSMUST00000197929 74 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm10400-201ENSMUST00000203920 3835 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm44404-201ENSMUST00000203979 636 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 AC117656.3-204ENSMUST00000225656 859 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm9762-201ENSMUST00000036976 444 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm22154-201ENSMUST00000083844 131 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav5d-4Q5R1F6 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm23472-201ENSMUST00000101806 191 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm22782-201ENSMUST00000104082 132 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm14593-201ENSMUST00000119948 294 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm25321-201ENSMUST00000122558 102 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm23889-201ENSMUST00000122689 104 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm24854-201ENSMUST00000158025 98 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm8580-201ENSMUST00000160295 464 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Mir3075-201ENSMUST00000175340 85 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm24497-201ENSMUST00000177868 191 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm25939-201ENSMUST00000179876 191 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm27520-201ENSMUST00000184872 81 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm17946-201ENSMUST00000186856 538 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm43897-201ENSMUST00000204019 309 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm5471-201ENSMUST00000072732 337 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm23444-201ENSMUST00000082922 191 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Gm650-201ENSMUST00000144428 1551 ntBASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trav5d-4Q5R1F6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm24120-201ENSMUST00000103978 129 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm12697-201ENSMUST00000118008 667 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm13502-201ENSMUST00000121574 684 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm24592-201ENSMUST00000122505 106 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm22500-201ENSMUST00000158982 99 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm8292-201ENSMUST00000162574 396 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm16326-201ENSMUST00000162843 414 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm16561-201ENSMUST00000163001 192 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm28637-201ENSMUST00000179424 345 ntBASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav5d-4Q5R1F6 Gm27369-201ENSMUST00000185182 71 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms