Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm23232-201ENSMUST00000157300 105 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm24774-201ENSMUST00000157384 134 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm4248-201ENSMUST00000196905 316 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm32536-201ENSMUST00000205209 445 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm25140-201ENSMUST00000083254 140 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 AC154227.1-201ENSMUST00000228809 2467 ntBASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Trim41Q5NCC3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm26147-201ENSMUST00000104479 114 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm11970-201ENSMUST00000116105 320 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Defa-ps15-201ENSMUST00000118178 477 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm25966-201ENSMUST00000157169 117 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm22059-201ENSMUST00000157544 104 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm24392-201ENSMUST00000158136 103 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm24667-201ENSMUST00000158938 103 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm42453-201ENSMUST00000200477 409 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 AC154335.2-201ENSMUST00000225916 638 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 AC172751.1-201ENSMUST00000226887 440 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Gm45853-201ENSMUST00000212310 3171 ntBASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim41Q5NCC3 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC8.21□□□□□ -1.09
Trim41Q5NCC3 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim41Q5NCC3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC8.21□□□□□ -1.09
Trim41Q5NCC3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC8.21□□□□□ -1.09
Trim41Q5NCC3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Trim41Q5NCC3 Gm43887-201ENSMUST00000204727 3186 ntBASIC8.21□□□□□ -1.09
Trim41Q5NCC3 AC154462.1-201ENSMUST00000228897 2260 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm14770-201ENSMUST00000122197 312 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm23168-201ENSMUST00000157156 143 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Mir5134-201ENSMUST00000175529 78 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm25935-201ENSMUST00000178746 107 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm25024-201ENSMUST00000179667 104 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Mir7118-201ENSMUST00000197760 61 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 AC192091.2-201ENSMUST00000217869 117 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm25814-201ENSMUST00000082754 107 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm37387-201ENSMUST00000192201 1806 ntBASIC8.21□□□□□ -1.1
Trim41Q5NCC3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim41Q5NCC3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm43011-201ENSMUST00000197897 4433 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Mir667-201ENSMUST00000102441 92 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm25764-201ENSMUST00000104092 134 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm24987-201ENSMUST00000104453 134 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm12379-201ENSMUST00000119607 391 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm24131-201ENSMUST00000158539 107 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm28967-201ENSMUST00000187351 281 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm43304-201ENSMUST00000196803 326 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm44657-201ENSMUST00000208568 450 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Mir302d-201ENSMUST00000083513 66 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Gm37781-201ENSMUST00000194773 3218 ntBASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim41Q5NCC3 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm23318-201ENSMUST00000158000 108 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm6615-201ENSMUST00000199426 631 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim41Q5NCC3 AC121942.2-201ENSMUST00000223824 600 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 AC129308.2-201ENSMUST00000224588 789 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm6065-201ENSMUST00000081336 492 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Gm26066-201ENSMUST00000083385 109 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Trim41Q5NCC3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Snord19-201ENSMUST00000104609 76 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm11065-201ENSMUST00000111462 228 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Gm24739-201ENSMUST00000158855 292 ntBASIC8.18□□□□□ -1.1
Trim41Q5NCC3 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms