Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trim40Q3UWA4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.9□□□□□ -1.95
Trim40Q3UWA4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm25833-201ENSMUST00000104137 133 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm12427-201ENSMUST00000117719 302 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm11813-201ENSMUST00000118586 291 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm14428-201ENSMUST00000120408 822 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm11819-201ENSMUST00000122192 372 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm26477-201ENSMUST00000122617 323 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm23213-201ENSMUST00000122715 313 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm25294-201ENSMUST00000122791 104 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm22722-201ENSMUST00000157467 132 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm25706-201ENSMUST00000157828 247 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm24534-201ENSMUST00000157949 291 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm22833-201ENSMUST00000158292 132 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm22839-201ENSMUST00000158436 304 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm24551-201ENSMUST00000158645 92 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm26991-201ENSMUST00000180950 620 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm28628-201ENSMUST00000187006 264 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm28629-201ENSMUST00000187309 263 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Trbv22-201ENSMUST00000191697 291 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Mir5121-201ENSMUST00000198528 74 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm43393-201ENSMUST00000200147 194 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm44295-201ENSMUST00000203805 437 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm18160-201ENSMUST00000214279 827 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL935138.1-201ENSMUST00000215309 196 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm19219-201ENSMUST00000215863 724 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Trim40Q3UWA4 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.89□□□□□ -1.95
Trim40Q3UWA4 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm12268-201ENSMUST00000118398 442 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm12825-201ENSMUST00000120249 563 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm13406-201ENSMUST00000121991 256 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm12045-201ENSMUST00000122122 573 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm5967-201ENSMUST00000172723 494 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm22716-201ENSMUST00000177596 107 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm25670-201ENSMUST00000178423 107 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm26239-201ENSMUST00000178842 107 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm24267-201ENSMUST00000179841 107 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Mir6372-201ENSMUST00000185114 109 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm45232-201ENSMUST00000207811 162 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm24292-201ENSMUST00000082888 107 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Gm4017-201ENSMUST00000084813 338 ntBASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Trim40Q3UWA4 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Trim40Q3UWA4 Gm3940-201ENSMUST00000105087 432 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms