Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm13349-201ENSMUST00000118436 411 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm13574-201ENSMUST00000120482 394 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm22516-201ENSMUST00000158266 124 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm23025-201ENSMUST00000158769 111 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm3111-201ENSMUST00000167426 490 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm23402-201ENSMUST00000178130 107 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm24968-201ENSMUST00000179817 107 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm8676-201ENSMUST00000184206 637 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm27163-201ENSMUST00000184767 409 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm28648-201ENSMUST00000190092 343 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm43232-201ENSMUST00000201346 364 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm44990-201ENSMUST00000203922 217 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm45380-201ENSMUST00000210465 315 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm24611-201ENSMUST00000083272 107 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.86□□□□□ -1.95
Trafd1Q3UDK1 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm43047-201ENSMUST00000200089 3460 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm22939-201ENSMUST00000103958 131 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Mir294-201ENSMUST00000104710 84 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm14537-201ENSMUST00000117464 599 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm14815-201ENSMUST00000120060 488 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm6587-201ENSMUST00000120219 613 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm12044-201ENSMUST00000120335 213 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm25341-201ENSMUST00000157461 268 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm23895-201ENSMUST00000158108 160 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm26401-201ENSMUST00000158502 76 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm7909-201ENSMUST00000182688 614 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm43245-201ENSMUST00000197603 468 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm44208-201ENSMUST00000205199 421 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Olfr895-201ENSMUST00000093864 951 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Trafd1Q3UDK1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm25563-201ENSMUST00000104603 74 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm12598-201ENSMUST00000117333 830 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm14469-201ENSMUST00000118363 202 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm14982-201ENSMUST00000121102 442 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm11321-201ENSMUST00000121257 902 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm14804-201ENSMUST00000122322 508 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm24836-201ENSMUST00000122609 108 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm25052-201ENSMUST00000122661 158 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm26393-201ENSMUST00000157625 129 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm22765-201ENSMUST00000158371 128 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm23473-201ENSMUST00000158883 116 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm17187-201ENSMUST00000164622 410 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm25470-201ENSMUST00000175576 111 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm23269-201ENSMUST00000178701 107 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm29045-201ENSMUST00000187278 698 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm24350-202ENSMUST00000198309 132 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm44076-201ENSMUST00000203072 520 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm44030-201ENSMUST00000204865 432 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm30534-201ENSMUST00000217928 207 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Gm25792-201ENSMUST00000083289 100 ntBASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Trafd1Q3UDK1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.84□□□□□ -1.96
Trafd1Q3UDK1 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.96
Trafd1Q3UDK1 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
Trafd1Q3UDK1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Trafd1Q3UDK1 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms