Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm26701-201ENSMUST00000181571 234 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm27905-201ENSMUST00000184005 207 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Npn2-202ENSMUST00000189275 235 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm8747-201ENSMUST00000195392 751 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm5001-201ENSMUST00000204361 331 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Snord35b-201ENSMUST00000082833 87 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm22740-201ENSMUST00000083439 109 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ddb1Q3U1J4 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm11367-201ENSMUST00000117802 120 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm11813-201ENSMUST00000118586 291 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm11429-201ENSMUST00000119089 144 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm13873-201ENSMUST00000119208 427 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm15112-201ENSMUST00000120152 860 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm16021-201ENSMUST00000121176 219 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm23078-201ENSMUST00000157848 148 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm24439-201ENSMUST00000157894 117 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm26171-201ENSMUST00000158422 131 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Mir6916-201ENSMUST00000184514 63 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm28700-201ENSMUST00000187614 579 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm44609-201ENSMUST00000207157 460 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.53□□□□□ -1.68
Ddb1Q3U1J4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
Ddb1Q3U1J4 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm23697-201ENSMUST00000103897 110 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm14647-201ENSMUST00000119392 680 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm7071-201ENSMUST00000120458 462 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm23668-201ENSMUST00000157465 111 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm28724-201ENSMUST00000186149 625 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm37732-201ENSMUST00000194377 316 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm18384-201ENSMUST00000195974 808 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm44011-201ENSMUST00000203336 394 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm44142-201ENSMUST00000203358 311 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm45105-201ENSMUST00000207824 397 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm7407-201ENSMUST00000208301 568 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm19140-201ENSMUST00000209790 421 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm23848-201ENSMUST00000083826 106 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm24817-201ENSMUST00000093672 105 ntBASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Ddb1Q3U1J4 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm13273-201ENSMUST00000119737 159 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm15466-201ENSMUST00000122299 333 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm15212-201ENSMUST00000122403 466 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm14364-201ENSMUST00000129209 267 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm25456-201ENSMUST00000157952 109 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm22910-201ENSMUST00000178568 132 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm24019-201ENSMUST00000178620 107 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm26243-201ENSMUST00000179260 107 ntBASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Ddb1Q3U1J4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms