Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.58□□□□□ -2
Ctdnep1Q3TP92 Gm35558-202ENSMUST00000221819 499 ntBASIC2.58□□□□□ -2
Ctdnep1Q3TP92 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.58□□□□□ -2
Ctdnep1Q3TP92 Gm46389-201ENSMUST00000223199 392 ntBASIC2.58□□□□□ -2
Ctdnep1Q3TP92 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.58□□□□□ -2
Ctdnep1Q3TP92 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Ctdnep1Q3TP92 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm14880-201ENSMUST00000117581 292 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm2066-201ENSMUST00000118046 389 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm2318-201ENSMUST00000119623 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm12383-201ENSMUST00000120628 760 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm2005-201ENSMUST00000120759 542 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm22478-201ENSMUST00000122570 154 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm22818-201ENSMUST00000157446 104 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm22083-201ENSMUST00000157586 102 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm24769-201ENSMUST00000158506 129 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm22500-201ENSMUST00000158982 99 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm16326-201ENSMUST00000162843 414 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm20648-201ENSMUST00000175815 328 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7438-201ENSMUST00000177664 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7408-201ENSMUST00000178014 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7386-201ENSMUST00000178020 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm3657-201ENSMUST00000178170 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7415-201ENSMUST00000178205 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7398-201ENSMUST00000178589 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7391-201ENSMUST00000178680 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm7375-201ENSMUST00000179232 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm3681-201ENSMUST00000179940 639 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Mir6411-201ENSMUST00000183556 108 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm19694-201ENSMUST00000192364 505 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm44348-201ENSMUST00000200165 122 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm45316-201ENSMUST00000210128 162 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm45522-201ENSMUST00000210784 166 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm45742-201ENSMUST00000212400 433 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm2544-201ENSMUST00000222702 756 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ctdnep1Q3TP92 Gm24120-201ENSMUST00000103978 129 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm11356-201ENSMUST00000118974 192 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm11819-201ENSMUST00000122192 372 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm17061-201ENSMUST00000163167 499 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm17655-201ENSMUST00000167969 255 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm28926-201ENSMUST00000191063 680 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm37533-201ENSMUST00000193848 545 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Mir7232-201ENSMUST00000197929 74 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm25131-201ENSMUST00000082653 151 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm24928-201ENSMUST00000083399 107 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm25897-201ENSMUST00000083709 107 ntBASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ctdnep1Q3TP92 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm14238-201ENSMUST00000120227 323 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm16510-201ENSMUST00000153501 249 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm25557-201ENSMUST00000158084 315 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Mir5136-201ENSMUST00000175573 76 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm43142-201ENSMUST00000198670 361 ntBASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.55□□□□□ -2
Ctdnep1Q3TP92 Gm44634-201ENSMUST00000206119 152 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms