Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm43600-201ENSMUST00000202134 223 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm44478-201ENSMUST00000204875 114 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm45551-201ENSMUST00000211459 928 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim43aQ3TL54 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim43aQ3TL54 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm23628-201ENSMUST00000082464 173 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim43aQ3TL54 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.54□□□□□ -2
Trim43aQ3TL54 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trim43aQ3TL54 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm11460-201ENSMUST00000118200 361 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm15103-201ENSMUST00000119893 871 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm14588-201ENSMUST00000119895 172 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm14593-201ENSMUST00000119948 294 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm11575-201ENSMUST00000122243 228 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm22764-201ENSMUST00000158370 92 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm15900-201ENSMUST00000161584 342 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm17538-201ENSMUST00000168236 327 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Mir3075-201ENSMUST00000175340 85 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm20660-201ENSMUST00000177515 289 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.53□□□□□ -2
Trim43aQ3TL54 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm22252-201ENSMUST00000179316 79 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm28951-201ENSMUST00000190742 313 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm32033-201ENSMUST00000193483 339 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm45288-201ENSMUST00000210236 151 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trim43aQ3TL54 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm9762-201ENSMUST00000036976 444 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.53□□□□□ -2
Trim43aQ3TL54 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim43aQ3TL54 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm13082-201ENSMUST00000118877 561 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm14517-201ENSMUST00000119040 337 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm12368-201ENSMUST00000122251 434 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm26280-201ENSMUST00000157096 101 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm43541-201ENSMUST00000197208 581 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm43407-201ENSMUST00000199816 317 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm6590-201ENSMUST00000203343 687 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm4921-201ENSMUST00000219804 992 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm24313-201ENSMUST00000082561 133 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm22005-201ENSMUST00000082795 141 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm23723-201ENSMUST00000082996 132 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.52□□□□□ -2.01
Trim43aQ3TL54 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Mir599-201ENSMUST00000102378 88 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm24670-201ENSMUST00000104154 132 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm26247-201ENSMUST00000116702 91 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm14677-201ENSMUST00000117866 486 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm13424-201ENSMUST00000122301 354 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm24780-201ENSMUST00000157635 143 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm22500-201ENSMUST00000158982 99 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm7346-201ENSMUST00000169661 476 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Mir3076-201ENSMUST00000175415 60 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Trbv7-201ENSMUST00000193339 402 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm9373-201ENSMUST00000208724 599 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm6796-201ENSMUST00000211919 243 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm35262-201ENSMUST00000215133 267 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 AC158388.1-201ENSMUST00000225441 256 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trim43aQ3TL54 Gm15936-201ENSMUST00000118706 460 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm23867-201ENSMUST00000122649 274 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm23588-201ENSMUST00000157659 99 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm8580-201ENSMUST00000160295 464 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm21827-201ENSMUST00000178247 423 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm22776-201ENSMUST00000178634 94 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm23767-201ENSMUST00000179278 94 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm19224-201ENSMUST00000190477 793 ntBASIC2.5□□□□□ -2.01
Trim43aQ3TL54 Gm20915-201ENSMUST00000191575 663 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms