Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Gm25079-201ENSMUST00000082529 203 ntBASIC4.58□□□□□ -1.68
Shroom4Q1W617 Gm23345-201ENSMUST00000083817 150 ntBASIC4.58□□□□□ -1.68
Shroom4Q1W617 Gm23846-201ENSMUST00000083835 107 ntBASIC4.58□□□□□ -1.68
Shroom4Q1W617 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Gm13136-201ENSMUST00000121031 2950 ntBASIC4.58□□□□□ -1.68
Shroom4Q1W617 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Shroom4Q1W617 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm15108-201ENSMUST00000116160 803 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm12492-201ENSMUST00000117665 564 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm14852-201ENSMUST00000120065 647 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm11575-201ENSMUST00000122243 228 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Shroom4Q1W617 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm24443-201ENSMUST00000157242 132 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm25981-201ENSMUST00000157921 295 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Mir3076-201ENSMUST00000175415 60 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm27648-201ENSMUST00000184315 107 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm44519-201ENSMUST00000206486 122 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm2436-201ENSMUST00000219562 774 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm7117-201ENSMUST00000071515 387 ntBASIC4.57□□□□□ -1.68
Shroom4Q1W617 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Shroom4Q1W617 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm23803-201ENSMUST00000104610 132 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm22072-201ENSMUST00000116850 121 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm11221-201ENSMUST00000117230 597 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm12935-201ENSMUST00000119352 246 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm15157-201ENSMUST00000121852 702 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm25434-201ENSMUST00000158278 167 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm23024-201ENSMUST00000158770 292 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm9613-201ENSMUST00000171662 196 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm27942-201ENSMUST00000184669 101 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm43979-201ENSMUST00000203179 475 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm18855-201ENSMUST00000206689 570 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm45508-201ENSMUST00000209298 299 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm45312-201ENSMUST00000210566 311 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm45710-201ENSMUST00000212847 215 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm29818-201ENSMUST00000218070 165 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Igkv13-87-201ENSMUST00000114214 286 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm11905-201ENSMUST00000117653 678 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm12881-201ENSMUST00000121191 203 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm22961-201ENSMUST00000157964 106 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Snord93-201ENSMUST00000175580 71 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm29550-201ENSMUST00000185543 285 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm28151-201ENSMUST00000189404 951 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm37193-201ENSMUST00000193087 513 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm38076-201ENSMUST00000193889 450 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm43510-201ENSMUST00000197922 353 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Mir378a-201ENSMUST00000198300 66 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Gm7422-201ENSMUST00000220115 640 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Mir21a-201ENSMUST00000083521 92 ntBASIC4.56□□□□□ -1.68
Shroom4Q1W617 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Shroom4Q1W617 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Shroom4Q1W617 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Shroom4Q1W617 AC124561.2-201ENSMUST00000226657 1973 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm45038-201ENSMUST00000207537 3838 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm37928-201ENSMUST00000193265 4131 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm13627-201ENSMUST00000119700 706 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm12880-201ENSMUST00000120652 494 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm14530-201ENSMUST00000122391 333 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm24847-201ENSMUST00000158032 108 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm23268-201ENSMUST00000175494 78 ntBASIC4.55□□□□□ -1.68
Shroom4Q1W617 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms