Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm26121-201ENSMUST00000083364 162 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Mir21a-201ENSMUST00000083521 92 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm22681-201ENSMUST00000083853 106 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm24164-201ENSMUST00000093663 104 ntBASIC5.29□□□□□ -1.56
Col9a1Q05722 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col9a1Q05722 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col9a1Q05722 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col9a1Q05722 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm25022-201ENSMUST00000102205 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm24127-201ENSMUST00000104110 130 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm25962-201ENSMUST00000157173 168 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm24224-201ENSMUST00000158828 258 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-6-201ENSMUST00000177790 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-3-201ENSMUST00000178082 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-7-201ENSMUST00000178635 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-10-201ENSMUST00000179320 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-5-201ENSMUST00000179352 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-2-201ENSMUST00000179447 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-9-201ENSMUST00000179752 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm22069-201ENSMUST00000179911 107 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-4-201ENSMUST00000179923 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mir467a-8-201ENSMUST00000180070 83 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm27753-201ENSMUST00000184742 203 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.28□□□□□ -1.56
Col9a1Q05722 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Mecom-201ENSMUST00000061088 348 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm10172-201ENSMUST00000085929 558 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col9a1Q05722 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.28□□□□□ -1.56
Col9a1Q05722 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col9a1Q05722 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm10400-201ENSMUST00000203920 3835 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm14626-201ENSMUST00000117619 216 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm17014-201ENSMUST00000120765 168 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm7840-201ENSMUST00000122086 533 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm24726-201ENSMUST00000158232 121 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm24553-201ENSMUST00000158653 131 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm23415-201ENSMUST00000175519 83 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm27492-201ENSMUST00000185194 187 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm5876-201ENSMUST00000203735 243 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm44519-201ENSMUST00000206486 122 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm18015-201ENSMUST00000214879 316 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.27□□□□□ -1.57
Col9a1Q05722 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col9a1Q05722 Gm45093-201ENSMUST00000206859 2463 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col9a1Q05722 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.26□□□□□ -1.57
Col9a1Q05722 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms