Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.03□□□□□ -1.76
Ercc3P49135 Gm23379-201ENSMUST00000180026 107 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.03□□□□□ -1.76
Ercc3P49135 Gm45240-201ENSMUST00000211437 674 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm18160-201ENSMUST00000214279 827 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.03□□□□□ -1.76
Ercc3P49135 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.03□□□□□ -1.76
Ercc3P49135 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.03□□□□□ -1.76
Ercc3P49135 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 AC109172.2-201ENSMUST00000228792 381 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ercc3P49135 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Ercc3P49135 Gm4987-201ENSMUST00000078326 408 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ercc3P49135 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm25876-201ENSMUST00000104329 119 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm15733-201ENSMUST00000132957 242 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.02□□□□□ -1.77
Ercc3P49135 Gm17162-201ENSMUST00000168538 473 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Mir6383-201ENSMUST00000184545 116 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm18185-201ENSMUST00000186725 667 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm29064-201ENSMUST00000187014 813 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm28163-201ENSMUST00000187099 325 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm7858-201ENSMUST00000190177 622 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm43115-201ENSMUST00000196244 160 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm19147-201ENSMUST00000199622 652 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm19126-201ENSMUST00000207896 509 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC4.02□□□□□ -1.77
Ercc3P49135 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.02□□□□□ -1.77
Ercc3P49135 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 CT572983.1-201ENSMUST00000226895 514 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ercc3P49135 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.02□□□□□ -1.77
Ercc3P49135 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ercc3P49135 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ercc3P49135 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ercc3P49135 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
Ercc3P49135 Gm22771-201ENSMUST00000104449 91 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm14570-201ENSMUST00000119444 391 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ercc3P49135 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.01□□□□□ -1.77
Ercc3P49135 Mir3106-201ENSMUST00000175401 82 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm20689-201ENSMUST00000176033 279 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Ercc3P49135 Gm8242-202ENSMUST00000193056 475 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm29950-201ENSMUST00000195273 237 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm42665-201ENSMUST00000202100 586 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Gm44084-201ENSMUST00000203947 409 ntBASIC4.01□□□□□ -1.77
Ercc3P49135 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ercc3P49135 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Ercc3P49135 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Ercc3P49135 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Ercc3P49135 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ercc3P49135 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Ercc3P49135 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Ercc3P49135 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ercc3P49135 Gm14681-201ENSMUST00000118047 411 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm13167-201ENSMUST00000118554 578 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm25637-201ENSMUST00000157529 107 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm22597-201ENSMUST00000157602 80 ntBASIC4□□□□□ -1.77
Ercc3P49135 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4□□□□□ -1.77
Ercc3P49135 Gm22290-201ENSMUST00000177655 107 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm22583-201ENSMUST00000178031 107 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm8816-201ENSMUST00000182280 1163 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm38395-201ENSMUST00000199904 830 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm35876-201ENSMUST00000205044 459 ntBASIC4□□□□□ -1.77
Ercc3P49135 Gm44923-201ENSMUST00000206673 85 ntBASIC4□□□□□ -1.77
Ercc3P49135 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4□□□□□ -1.77
Ercc3P49135 AC134596.2-201ENSMUST00000222158 171 ntBASIC4□□□□□ -1.77
Ercc3P49135 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4□□□□□ -1.77
Ercc3P49135 Gm26055-201ENSMUST00000083038 107 ntBASIC4□□□□□ -1.77
Ercc3P49135 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Ercc3P49135 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms