Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm24859-201ENSMUST00000082729 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23057-201ENSMUST00000082801 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26328-201ENSMUST00000082821 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26331-201ENSMUST00000082824 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24205-201ENSMUST00000082953 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25405-201ENSMUST00000082973 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22628-201ENSMUST00000082988 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26324-201ENSMUST00000083073 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24535-201ENSMUST00000083140 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26496-201ENSMUST00000083150 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26127-201ENSMUST00000083193 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24456-201ENSMUST00000083198 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24458-201ENSMUST00000083204 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24018-201ENSMUST00000083232 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25794-201ENSMUST00000083286 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25790-201ENSMUST00000083293 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22295-201ENSMUST00000083311 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25127-201ENSMUST00000083336 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25583-201ENSMUST00000083413 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25577-201ENSMUST00000083414 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24414-201ENSMUST00000083434 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24861-201ENSMUST00000083459 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24803-201ENSMUST00000083693 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23103-201ENSMUST00000083725 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22580-201ENSMUST00000083727 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24260-201ENSMUST00000083741 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm23732-201ENSMUST00000083751 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22682-201ENSMUST00000083854 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm25869-201ENSMUST00000083855 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24693-201ENSMUST00000083885 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26317-201ENSMUST00000083894 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22352-201ENSMUST00000083917 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm24448-201ENSMUST00000083979 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22798-201ENSMUST00000083992 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm26427-201ENSMUST00000093648 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22886-201ENSMUST00000093714 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Gm22170-201ENSMUST00000097247 107 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.18□□□□□ -1.58
Rfx1P48377 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rfx1P48377 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rfx1P48377 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Rfx1P48377 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Rfx1P48377 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rfx1P48377 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Rfx1P48377 Mir294-201ENSMUST00000104710 84 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm11936-201ENSMUST00000118323 160 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm13396-201ENSMUST00000120617 271 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm23327-201ENSMUST00000157420 78 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm22598-201ENSMUST00000157600 127 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm16232-201ENSMUST00000162856 167 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm22243-201ENSMUST00000178754 120 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Mir7022-201ENSMUST00000183749 61 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.17□□□□□ -1.58
Rfx1P48377 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Rfx1P48377 Mir6335-201ENSMUST00000184081 98 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Mir6383-201ENSMUST00000184545 116 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.17□□□□□ -1.58
Rfx1P48377 Gm37431-201ENSMUST00000195102 111 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm17775-201ENSMUST00000198542 258 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm45007-201ENSMUST00000206237 366 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm6240-201ENSMUST00000208014 473 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Rfx1P48377 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Rfx1P48377 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Rfx1P48377 Gm37204-201ENSMUST00000192389 3961 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Rfx1P48377 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Rfx1P48377 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm43327-201ENSMUST00000199285 4055 ntBASIC5.17□□□□□ -1.58
Rfx1P48377 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Rfx1P48377 AC121598.3-201ENSMUST00000227179 1643 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Rfx1P48377 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rfx1P48377 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Rfx1P48377 Gm22272-201ENSMUST00000104039 134 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm14656-201ENSMUST00000120342 502 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm13903-201ENSMUST00000120945 193 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm23902-201ENSMUST00000157571 134 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm25383-201ENSMUST00000157810 144 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm22839-201ENSMUST00000158436 304 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.16□□□□□ -1.58
Rfx1P48377 Gm3370-201ENSMUST00000171785 500 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Mir7056-201ENSMUST00000183776 59 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Mir6346-201ENSMUST00000183982 81 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm29610-201ENSMUST00000187749 453 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm29665-201ENSMUST00000191457 528 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm42647-201ENSMUST00000195939 459 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm5876-201ENSMUST00000203735 243 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm43955-201ENSMUST00000204332 142 ntBASIC5.16□□□□□ -1.58
Rfx1P48377 Gm45207-201ENSMUST00000207469 145 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms