Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13876-201ENSMUST00000118451 261 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm14986-201ENSMUST00000121262 1002 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm16569-201ENSMUST00000160526 314 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC1.64□□□□□ -2.15
HttP42859 Gm27921-201ENSMUST00000183968 108 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm27977-201ENSMUST00000185159 111 ntBASIC1.64□□□□□ -2.15
HttP42859 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm31532-201ENSMUST00000203555 767 ntBASIC1.64□□□□□ -2.15
HttP42859 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.64□□□□□ -2.15
HttP42859 Gm14385-201ENSMUST00000116315 876 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm23991-201ENSMUST00000117033 93 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm22311-201ENSMUST00000158006 110 ntBASIC1.64□□□□□ -2.15
HttP42859 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HttP42859 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC1.64□□□□□ -2.15
HttP42859 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.64□□□□□ -2.15
HttP42859 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HttP42859 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HttP42859 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.63□□□□□ -2.15
HttP42859 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Gm22780-201ENSMUST00000104084 132 ntBASIC1.63□□□□□ -2.15
HttP42859 Gm43659-201ENSMUST00000200894 628 ntBASIC1.63□□□□□ -2.15
HttP42859 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.63□□□□□ -2.15
HttP42859 Gm45313-201ENSMUST00000210584 178 ntBASIC1.63□□□□□ -2.15
HttP42859 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.63□□□□□ -2.15
HttP42859 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Gm30341-201ENSMUST00000194363 289 ntBASIC1.63□□□□□ -2.15
HttP42859 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Gm42774-201ENSMUST00000198854 283 ntBASIC1.63□□□□□ -2.15
HttP42859 Gm45268-201ENSMUST00000210046 370 ntBASIC1.63□□□□□ -2.15
HttP42859 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.63□□□□□ -2.15
HttP42859 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HttP42859 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
HttP42859 Gm6395-201ENSMUST00000167639 691 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm6801-201ENSMUST00000190697 339 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC1.62□□□□□ -2.15
HttP42859 Gm12351-201ENSMUST00000118727 292 ntBASIC1.62□□□□□ -2.15
HttP42859 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
HttP42859 Gm24475-201ENSMUST00000157435 143 ntBASIC1.62□□□□□ -2.15
HttP42859 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.62□□□□□ -2.15
HttP42859 Gm23517-201ENSMUST00000082830 192 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.62□□□□□ -2.15
HttP42859 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.62□□□□□ -2.15
HttP42859 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HttP42859 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HttP42859 Gm2855-201ENSMUST00000166765 456 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm43193-201ENSMUST00000197732 441 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm43431-201ENSMUST00000198577 340 ntBASIC1.62□□□□□ -2.15
HttP42859 Gm22478-201ENSMUST00000122570 154 ntBASIC1.61□□□□□ -2.15
HttP42859 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HttP42859 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HttP42859 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.61□□□□□ -2.15
HttP42859 Gm44052-201ENSMUST00000203382 396 ntBASIC1.61□□□□□ -2.15
HttP42859 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.61□□□□□ -2.15
HttP42859 Gm15161-201ENSMUST00000117340 387 ntBASIC1.61□□□□□ -2.15
HttP42859 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.61□□□□□ -2.15
HttP42859 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.61□□□□□ -2.15
HttP42859 AC159297.1-201ENSMUST00000218689 290 ntBASIC1.61□□□□□ -2.15
HttP42859 Gm6985-201ENSMUST00000121255 271 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.6□□□□□ -2.15
HttP42859 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.6□□□□□ -2.15
HttP42859 Gm12646-201ENSMUST00000119144 238 ntBASIC1.6□□□□□ -2.15
HttP42859 Mir1927-201ENSMUST00000158579 109 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm17161-201ENSMUST00000169187 524 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm25247-201ENSMUST00000175475 90 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm28060-201ENSMUST00000191554 189 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm42533-201ENSMUST00000196247 157 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm35931-201ENSMUST00000203931 448 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm44478-201ENSMUST00000204875 114 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.6□□□□□ -2.15
HttP42859 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HttP42859 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC1.6□□□□□ -2.15
HttP42859 Gm44425-201ENSMUST00000203739 429 ntBASIC1.6□□□□□ -2.15
HttP42859 AC124549.2-201ENSMUST00000224243 222 ntBASIC1.6□□□□□ -2.15
HttP42859 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.6□□□□□ -2.15
HttP42859 Gm10212-201ENSMUST00000087884 324 ntBASIC1.6□□□□□ -2.15
HttP42859 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HttP42859 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.59□□□□□ -2.15
HttP42859 Gm13471-201ENSMUST00000122057 433 ntBASIC1.59□□□□□ -2.15
HttP42859 Gm7209-201ENSMUST00000122339 333 ntBASIC1.59□□□□□ -2.15
HttP42859 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
HttP42859 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HttP42859 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.59□□□□□ -2.15
HttP42859 Gm9068-201ENSMUST00000217393 455 ntBASIC1.59□□□□□ -2.15
HttP42859 Gm19233-201ENSMUST00000219772 936 ntBASIC1.59□□□□□ -2.15
HttP42859 Gm25971-201ENSMUST00000158953 286 ntBASIC1.59□□□□□ -2.16
HttP42859 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.59□□□□□ -2.16
HttP42859 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
HttP42859 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm15896-201ENSMUST00000118045 440 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm23435-201ENSMUST00000157183 156 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm26406-201ENSMUST00000158503 124 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.58□□□□□ -2.16
HttP42859 Snord21-201ENSMUST00000082519 94 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.58□□□□□ -2.16
HttP42859 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.58□□□□□ -2.16
HttP42859 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm6373-201ENSMUST00000121026 360 ntBASIC1.58□□□□□ -2.16
HttP42859 Gm26049-201ENSMUST00000157313 108 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms